| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4325 |
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| Symbol | ccmC |
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| ID | 1044099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 4915319 |
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| End bp | 4916086 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637147722 |
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| Product | heme exporter protein CcmC |
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| Protein accession | NP_746440 |
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| Protein GI | 26991015 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01191] heme exporter protein CcmC |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.102702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAATAA GCTGGACGTG GTTCCACAAG CTGGGCTCCC CGAAATGGTT CTATGCCATC
AGCGGCCGCA TGCTGCCGTG GCTGGCCGGT GCTGCCGTGC TCCTGCTGCT GGTCGGCATC
ACCTGGGGCC TGGCCTTCGC CCCCCAGGAC TACCAGCAGG GCAACAGCTT CCGCATCATC
TATATCCATG TGCCGGCGGC GATGCTGGCG CAGTCCTGCT ATGTGCTGCT GGCGGTGGCC
GGGGTGGTGG GGCTGGTGTG GAAGATGAAA CTGGCCGACG TCGCCCTGCA GTGTGCCGCG
CCCATTGGCG CCTGGATGAC CGCCGTGGCG CTGGTTACCG GCGCCATCTG GGGCAAGCCG
ACCTGGGGCA GCTGGTGGGT GTGGGATGCC CGCCTTACGT CCATGCTCAT CCTGCTGTTC
CTGTACTTCG GCATTATTGC GCTGGGCCAG GCGATCAGTA ATCGTGATAG TGCGGCCAAG
GCCTGTGCGG TGCTTGCGAT TGTCGGTGTG GTGAATATCC CGATCATCAA GTATTCGGTG
GAGTGGTGGA ACACCCTGCA CCAGGGGGCC ACCTTCACCC TTACCGAAAA GCCGGCGATG
CCGGCCGAAA TGTGGCTGCC GCTGTTGTGC ACGGCGCTGG GTTTCTACTG TTTCTTCGGC
GCCGTACTGC TGCTGCGCAT GCGCCTTGAA GTGCTCAAGC GCGAAGCACG CGCCAGTTGG
GTCAGGGACG AAGTATTGAA CAGCCTGGGG CGGAGGGCCG CACAATGA
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| Protein sequence | MKISWTWFHK LGSPKWFYAI SGRMLPWLAG AAVLLLLVGI TWGLAFAPQD YQQGNSFRII
YIHVPAAMLA QSCYVLLAVA GVVGLVWKMK LADVALQCAA PIGAWMTAVA LVTGAIWGKP
TWGSWWVWDA RLTSMLILLF LYFGIIALGQ AISNRDSAAK ACAVLAIVGV VNIPIIKYSV
EWWNTLHQGA TFTLTEKPAM PAEMWLPLLC TALGFYCFFG AVLLLRMRLE VLKREARASW
VRDEVLNSLG RRAAQ
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