| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4316 |
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| Symbol | |
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| ID | 1043861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 4906849 |
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| End bp | 4907787 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637147714 |
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| Product | 2-hydroxyacid dehydrogenase |
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| Protein accession | NP_746432 |
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| Protein GI | 26991007 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.64643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGA CAGTCCTGGT ACTGGTGGAA ACCGTCGACG ATTACCTGCC CATGCTGGAG
CAGGCCGGTT ACCACCTGAT CCGTGCCCCT TCGCCGCAAC TGCGCGCCGA TGCCATTCAT
CGCCACGCCG AAGAAATCGA TGCGGTACTC ACCCGTGGGC CGCTGGGGCT ATCCGCCACC
GAAATTGACG CATTACCCAG ATTGCAGATC ATCTGCGTGA TTGGCGCCGG CTACGAGCAG
GTCGACCTGG CCGCCGCCGC TGCCCGCGGC ATAACCGTCA CCAATGGCGC CGGGGCCAAT
GCCGCGGCCG TCGCCGACCA CACCCTGGCC CTGCTGCTGG CGCTGCTGCG CGACATCCCC
CGCGCCGATG CCAGCACGCG GCGCGGTGAA TGGAACCGGG TTATCAGCCC CTCGGTGAGT
GGCAAGCGCC TGGGCATTCT CGGCCTCGGC GCAGTGGGGC TGGCGATCGC CAAGCGGGCC
CACTTGGGCT TCGACATGCA CGTCAGCTAC CACAGCCGCA CAGCACGCCA GGATGTGCCC
TATGCCTGGT ACGACAGCCC CCGACACTTG GCTGAAGCCG TCGACATTCT GGTGGTGGCC
ACCCCCGGTG GCGCCAACAC CCGGCATCTG GTCGATGCCC ACGTCCTTCA GGCCCTGGGG
GTTGAAGGCT ATCTGGTGAA CATCGCCCGT GCCAGCGTGG TCGACACCCA GGCCCTGATT
GCTGCATTGC AGCGTGGCCA GCTGGCTGGC GCCGCGCTGG ATGTATTCGA TGACGAGCCG
ACAGTGCCCG ATGCACTCAA GGCCTTGCCC AACACCGTGC TCACACCCCA CGTGGCTGGC
CAGTCGCCAG AAGCCGCGCG CGACACGGTG GACTTGGTGC TGCGCAACCT GCAGGCGTTC
TTTGCCGGTG AGCCAGTTTT GACCCCGGTA CGCCCTTAA
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| Protein sequence | MSKTVLVLVE TVDDYLPMLE QAGYHLIRAP SPQLRADAIH RHAEEIDAVL TRGPLGLSAT
EIDALPRLQI ICVIGAGYEQ VDLAAAAARG ITVTNGAGAN AAAVADHTLA LLLALLRDIP
RADASTRRGE WNRVISPSVS GKRLGILGLG AVGLAIAKRA HLGFDMHVSY HSRTARQDVP
YAWYDSPRHL AEAVDILVVA TPGGANTRHL VDAHVLQALG VEGYLVNIAR ASVVDTQALI
AALQRGQLAG AALDVFDDEP TVPDALKALP NTVLTPHVAG QSPEAARDTV DLVLRNLQAF
FAGEPVLTPV RP
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