| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4309 |
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| Symbol | |
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| ID | 1043128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 4900536 |
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| End bp | 4902068 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637147707 |
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| Product | NCS1 nucleoside transporter |
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| Protein accession | NP_746425 |
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| Protein GI | 26991000 |
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| COG category | [F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1953] Cytosine/uracil/thiamine/allantoin permeases |
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| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.747865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAGCA GCCTCGACCT TGCCCCTGAA CTATCCGTCG CCAGCACACA CCCCGCGTCC
ACGCTTGCCG GCCACCAGCC GGACCTTGTT CTCAGCCCGC GCCTGCATAA CCGCGACCTC
GCGCCAACGC GTATGGAAGG CCGTCGCTGG GGCGGCTACA GCATCTTCGC GCTGTGGACA
AACGATGTGC ACAATATCGC CAACTATTCG TTCGCCATGG GCTTGTTCGC CCTCGGCCTG
GGTGGCTGGC AAATTCTGCT GTCGCTGGCC ATCGGCGCGG CACTGGTGTA CTTCTTCATG
AACCTGTCGG GTTACATGGG GCAGAAAACC GGGGTACCGT TCCCGGTCAT CAGCCGCATT
GCCTTCGGCA TCCACGGCGC GCAGATCCCG GCGCTGATCC GTGCCGTCAT CGCCATCGCC
TGGTTCGGCA TCCAGACCTA CCTGGCATCG GTGGTGCTGC GGGTGCTGCT CACCGCCGTT
TGGCCGCAAA TAGCAGCCTA CGACCACGAC AGCATCCTCG GCCTGTCGAG CCTGGGCTGG
GTGTGTTTCG TGTCGATCTG GCTGGTGCAG CTGGTGATCC TGGCCTACGG CATGGAGATG
GTGCGCCGTT ACGAGGCCTT TGCCGGGCCT GTGATCCTGC TGACCGTCGC CGCACTGGCG
GTGTTCATGT ACTTCAAGGC CGACGCGCGC ATTGCCTGGT CGGTGGCTAC GCCGCTGACC
GGCTACGAGA TGTGGCGCAA CATCTTTGCC GGCGGCGCAC TGTGGCTGGC GATCTACGGC
ACCCTGGTGC TGAACTTCTG TGACTTCGCC CGCTCCTCGC CTTGCCGCAA GACCATCCGC
GTGGGCAACT TCTGGGGCCT GCCGGTAAAC ATCCTGGTAT TCGCCGTGAT CACCGTGGTG
CTGTGCGGCG CGCAATTCCA GATCAACGGC CAGATCATCG ACAGCCCGAC GCAGATCGTT
GCCGCCATAC CCAGCACGCC ATTCCTGGTG CTCGGCTGCC TGGCCTTCCT GATCGTCACC
GTAGCGGTGA ACATCATGGC CAACTTCGTC GCCCCGGCTT TCGTACTCAG CAACCTGGCG
CCGCGCCACC TGAACTTCCG CCGTGCCGGG CTGATCAGCG CCACCCTGGC GGTGCTGATC
CTGCCCTGGA ACCTGTACAA CAGCCCGCTG GTGATCGTGT ACTTCCTGTC GGGCCTGGGC
GCCCTGCTAG GCCCGCTGTA CGGCGTGATC ATGTCCGACT ACTGGTTGCT GCGCAAAGGC
TGCATCAACG TGCCGGAGCT GTATACCGAG CACCCGGCCG GCGCCTATCA CTACAGCAAG
GGCATCAACC TGCGCGCCGT GGCCGCCTTC GTGCCGGCCG CACTGCTGGC CATCGTGCTG
GCCCTGGTGC CCAACTTCCA GGGCATCGCG CCGTTCTCCT GGCTGATTGG TGCCGGCATC
GCCGCCGCCC TATACCTGCT TATCGCGCCA CGTAACCGCC ATTACCACGA CGTCAGCGGC
GAGTGCATCG CCGTCGACCA CAGCGGCCAT TGA
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| Protein sequence | MSSSLDLAPE LSVASTHPAS TLAGHQPDLV LSPRLHNRDL APTRMEGRRW GGYSIFALWT
NDVHNIANYS FAMGLFALGL GGWQILLSLA IGAALVYFFM NLSGYMGQKT GVPFPVISRI
AFGIHGAQIP ALIRAVIAIA WFGIQTYLAS VVLRVLLTAV WPQIAAYDHD SILGLSSLGW
VCFVSIWLVQ LVILAYGMEM VRRYEAFAGP VILLTVAALA VFMYFKADAR IAWSVATPLT
GYEMWRNIFA GGALWLAIYG TLVLNFCDFA RSSPCRKTIR VGNFWGLPVN ILVFAVITVV
LCGAQFQING QIIDSPTQIV AAIPSTPFLV LGCLAFLIVT VAVNIMANFV APAFVLSNLA
PRHLNFRRAG LISATLAVLI LPWNLYNSPL VIVYFLSGLG ALLGPLYGVI MSDYWLLRKG
CINVPELYTE HPAGAYHYSK GINLRAVAAF VPAALLAIVL ALVPNFQGIA PFSWLIGAGI
AAALYLLIAP RNRHYHDVSG ECIAVDHSGH
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