Gene PP_4308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4308 
Symbol 
ID1041834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4899601 
End bp4900038 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content63% 
IMG OID637147706 
ProductAsnC family transcriptional regulator 
Protein accessionNP_746424 
Protein GI26990999 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATG CCATCGACCA ATTATTGATC AACGCACTGA TGGAGGACTC GCGCCGCTCG 
CTCAAGGCGC TGGCGCAGGT CAGCGGGCTG TCCGCACCCA GCGTCAGCGA GCGCCTGCGC
CGACTGGAAG AGCGTGGCGT GCTGCGCGGC TATACCGTGG AGGTCGACCC GCGCGCCTTT
GGCTACCAGT TGCAGGCGAT CGTGCGCATC CGTCCGCTAC CGGGGAAGCT GCAGGAGGTG
GAGCGCCAGA TCATTGCCAT CCCTGAGTTC ACCGAATGCG ACAAGGTCAT TGGCGAAGAC
TGCTTCGTCG CCCGACTGCA TGTGCGCTCG ATGGAGCAGC TGGACACCCT GCTCGACCTC
ATGAATGTGC TGGCCGAGAC CAATACCGCG ATCATCAAGA AGACCCCGGT CAAGCGGCGG
TTGCCGCCAA TGGATTGA
 
Protein sequence
MTDAIDQLLI NALMEDSRRS LKALAQVSGL SAPSVSERLR RLEERGVLRG YTVEVDPRAF 
GYQLQAIVRI RPLPGKLQEV ERQIIAIPEF TECDKVIGED CFVARLHVRS MEQLDTLLDL
MNVLAETNTA IIKKTPVKRR LPPMD