| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4297 |
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| Symbol | gcl |
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| ID | 1041768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 4886941 |
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| End bp | 4888716 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637147695 |
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| Product | glyoxylate carboligase |
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| Protein accession | NP_746413 |
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| Protein GI | 26990988 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3960] Glyoxylate carboligase |
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| TIGRFAM ID | [TIGR01504] glyoxylate carboligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAA TGAGAGCAAT CGATGCAGCC GTTCTGGTCA TGCGCCGTGA AGGTGTAGAT
ACCGCGTTCG GCATCCCGGG GGCTGCCATC AACCCGTTGT ATTCGGCCCT GAAAAAAGTC
GGTGGCATCG ATCACGTCCT CGCTCGTCAC GTCGAAGGTG CCTCGCACAT GGCCGAGGGC
TACACCCGCG CCAACCCGGG CAACATCGGT GTGTGCATCG GCACTTCCGG CCCTGCCGGC
ACCGACATGG TCACCGGCCT GTACAGTGCC TCGGCCGACT CCATCCCGAT TCTGTGCATC
ACTGGCCAGG CGCCACGTGC CCGTCTGCAC AAGGAAGACT TCCAGGCTGT CGACATCACC
AACATCGTCA AGCCAGTGAC CAAGTGGGCG ACCACCGTTC TGGAGCCAGG CCAGGTGCCT
TACGCCTTCC AGAAGGCCTT CTATGAAATG CGTACCGGCC GCCCAGGCCC GGTGCTGATC
GACCTGCCGT TCGACGTGCA GATGGCCGAA ATCGAATTCG ACATCGACGC CTACGAACCG
CTGCCCGTGC ACAAACCGTC CGCCACACGC GTACAGGCCG AAAAAGCCCT GGCCCTGCTC
AATGACGCCG AGCGCCCACT GCTGGTAGCC GGTGGCGGCA TCATCAACGC CGACGCCAGT
GACAAGCTGG TCGAATTCGC CGAACTGACC GGCGTACCCG TGATCCCGAC CCTGATGGGC
TGGGGCACCA TCCCGGACGA CCACGCACAG ATGGTCGGCA TGGTCGGCCT GCAGACCTCG
CACCGCTATG GCAACGCAAC CCTGCTGAAA TCCGACCTGG TGTTCGGTAT CGGTAACCGC
TGGGCCAACC GCCACACCGG TTCCGTCGAT GTCTACACCG AAGGCCGCAA GTTCGTGCAC
GTCGACATCG AACCGACCCA GATCGGCCGC GTGTTCACCC CGGACCTGGG CATCGTTTCC
GATGCTGGTA AGGCACTGGA CGTGTTCCTG GAAGTGGCCC GCGAGTGGAA AGCCGCCGGC
AAGCTCAAAT GCCGCAAGGC CTGGCTGGAA GAGTGCCAGG AGCGCAAGTC GAGCCTGCAG
CGCAAGACCC ACTTCGACAA CGTGCCGGTC AAGCCGCAGC GCGTCTACGA AGAAATGAAC
CAAGTGTTCG GCAAGGACAC CTGCTACGTC AGCACCATCG GCCTGTCGCA GATTGCCGGC
GCGCAGTTCC TGCATGTGTA CAAGCCTCGC CACTGGATCA ACTGCGGCCA GGCCGGCCCG
CTGGGCTGGA CCATCCCTGC TGCGCTGGGC GTGGTCAAAG CCGATCCGAA GCGCAAGGTT
GTGGCGCTGT CGGGTGACTA CGACTTCCAG TTCATGATCG AAGAACTGGC GGTAGGCGCC
CAGTTCAACC TGCCGTACGT CCACGTACTG GTGAACAACG CCTACCTGGG CCTGATCCGC
CAGGCGCAGC GTGGCTTCGA CATGGATTAC TGTGTACAAC TGGCGTTCGA GAACATCAAC
TCGACCGACG CTGCCACCTA CGGTGTCGAC CACGTCGCTG TGGTCGAAGG CCTGGGTTGC
AAGGCCATCC GTGTGTTCGA GCCAGCAGAA ATCGCCCCTG CCCTGATCAA GGCACAGAAG
ATGGCCGAAG AGTTCCGCGT GCCGGTGGTG GTTGAAGTGA TTCTCGAGCG TGTGACCAAC
ATTTCCATGG GCACCGAGAT CAACGCGGTC AACGAATTCG AAGACCTGGC CCTGGTCGGC
AACGACGCGC CAACCGCCAT CTCGCTGCTG GACTGA
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| Protein sequence | MSKMRAIDAA VLVMRREGVD TAFGIPGAAI NPLYSALKKV GGIDHVLARH VEGASHMAEG
YTRANPGNIG VCIGTSGPAG TDMVTGLYSA SADSIPILCI TGQAPRARLH KEDFQAVDIT
NIVKPVTKWA TTVLEPGQVP YAFQKAFYEM RTGRPGPVLI DLPFDVQMAE IEFDIDAYEP
LPVHKPSATR VQAEKALALL NDAERPLLVA GGGIINADAS DKLVEFAELT GVPVIPTLMG
WGTIPDDHAQ MVGMVGLQTS HRYGNATLLK SDLVFGIGNR WANRHTGSVD VYTEGRKFVH
VDIEPTQIGR VFTPDLGIVS DAGKALDVFL EVAREWKAAG KLKCRKAWLE ECQERKSSLQ
RKTHFDNVPV KPQRVYEEMN QVFGKDTCYV STIGLSQIAG AQFLHVYKPR HWINCGQAGP
LGWTIPAALG VVKADPKRKV VALSGDYDFQ FMIEELAVGA QFNLPYVHVL VNNAYLGLIR
QAQRGFDMDY CVQLAFENIN STDAATYGVD HVAVVEGLGC KAIRVFEPAE IAPALIKAQK
MAEEFRVPVV VEVILERVTN ISMGTEINAV NEFEDLALVG NDAPTAISLL D
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