Gene PP_4289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4289 
Symbol 
ID1041777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4879390 
End bp4880730 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content63% 
IMG OID637147687 
Producthypothetical protein 
Protein accessionNP_746405 
Protein GI26990980 
COG category[S] Function unknown 
COG ID[COG3748] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAGCAC ACCTTCACGA ATGGCTGAAC CTGAGCATTC GCTGGGTTCA CATGATCACC 
GGCGTCGCCT GGATCGGTGC ATCGTTCTAC TTCGTCTGGC TGGAGAACCA CCTGAACCGA
AGCAACCCGC GCGATGGGTT GTCAGGTGAT CTCTGGGCGA TTCACGGCGG TGGTATCTAC
CACCTGGAGA AATACAAGCT CGCCCCCCCG AAAATGCCCG AGAACCTGCA CTGGTTCAAA
TGGGAAGCCT ACTTCACCTG GATGTCCGGT ATCGCCCTGC TGTGCGTGGT GTTCTACTGG
AACCCGACCC TGTACCTGCT GGCACCTGGC AGCACCCTGA GCGGTGCCGA AGGCGTGGCC
ATCGGTATCG GTTCGCTGAT CGCGGGATGG TTCATCTACG ACTTCCTGTG CGACTCGCCC
CTGGGCAAGA AGCCAGCGCT GCTCGGTGCT GTGCTGTTCG TGCTGATCAT CGCTGCCTGC
TGGGGCTTCA GCCTGGTGTT CAGCGGCCGT GGCGCCTACC TGCACACCGG CGCGATCATC
GGCACCATCA TGGTCGGTAA CGTGTTCCGC ATCATCATGC CGGCCCAACG CCAGCTGGTG
GCGGCGATCG AGAACAACCA GACGCCCGAC CCGGTCCTGC CGGCCAAGGG CCTGCTGCGC
TCGCGTCACA ACAACTACTT CACCCTGCCG GTGCTGTTCA TCATGATCAG CAACCATTTC
CCGAGCACCT ACGGTAGCCA GTACAACTGG CTGATCCTGG CCGGTATCGC AGTAGCCGCG
GTTCTGATCC GCCACTACTT CAACACCCGC CACGACAGCA ACAAGTACGC CTGGACCCTG
CCCGTCGGCG CTCTGGCGAT GATCTGCCTG GCTTACGTTA CCGGCCCGAA ACCGATTGCC
GTAAGCCCTG AGCAAGCCGC AGCGAAGATC GAGTACCAGC CGCTGCCGGC AACTGCGGTA
GGCGGCAAGA CGGCTGCCGA GCAGCGTGCC GAGGACGCCG CCAAGGCTGC CGAAGCACCC
GCCGCACCTG CGCAAGCACC GGCCCAGGCC GCTGCCCAGG CCGCTGCCCA GGCCGGAGGT
GGCGAATTCG ACAAGATCCA CAATGTCATC CAGGAACGCT GCACTGTGTG CCACTCGTCC
AAGCCGACCA GCCCACTGTT CAGCACCGCC CCTGCCGGCG TGATGTTCGA CACTCCACAG
CAGATCCAGG CCCAGGCCGC GCGCATTCAG GCGCAAGCGG TTGCCAGCCA GATCATGCCG
CTGGGCAACA TCACCCAGAT GACCACCGAA GAGCGCAAGC TCGTCGGCGA CTGGATCGCC
AAAGGCGCCC AGGTCAACTG A
 
Protein sequence
MEAHLHEWLN LSIRWVHMIT GVAWIGASFY FVWLENHLNR SNPRDGLSGD LWAIHGGGIY 
HLEKYKLAPP KMPENLHWFK WEAYFTWMSG IALLCVVFYW NPTLYLLAPG STLSGAEGVA
IGIGSLIAGW FIYDFLCDSP LGKKPALLGA VLFVLIIAAC WGFSLVFSGR GAYLHTGAII
GTIMVGNVFR IIMPAQRQLV AAIENNQTPD PVLPAKGLLR SRHNNYFTLP VLFIMISNHF
PSTYGSQYNW LILAGIAVAA VLIRHYFNTR HDSNKYAWTL PVGALAMICL AYVTGPKPIA
VSPEQAAAKI EYQPLPATAV GGKTAAEQRA EDAAKAAEAP AAPAQAPAQA AAQAAAQAGG
GEFDKIHNVI QERCTVCHSS KPTSPLFSTA PAGVMFDTPQ QIQAQAARIQ AQAVASQIMP
LGNITQMTTE ERKLVGDWIA KGAQVN