| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4286 |
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| Symbol | |
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| ID | 1041762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 4877351 |
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| End bp | 4878277 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637147684 |
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| Product | polysaccharide deacetylase family protein |
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| Protein accession | NP_746402 |
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| Protein GI | 26990977 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR03212] putative urate catabolism protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.59502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGCTG ATTACCCTCG CGACCTGATC GGTTACGGCA ACAACCCTCC TCACCCGCAA
TGGCCGGGCA ACGCCCGCAT CGCGCTGTCT TTCGTCCTCA ATTACGAGGA AGGTGGCGAA
CGCAACATCC TGCACGGTGA CAAGGAATCC GAAGCCTTCC TGTCCGAGAT GGTCGCTGCC
CAACCCCTGC AGGGCCAGCG CAACATGAGC ATGGAGTCGC TGTATGAATA CGGCAGCCGT
GCCGGTGTAT GGCGCCTGCT GAAGCTGTTC AAGGACAGCG GCGTGCCACT CACCATCTTC
GCCGTGGCCA TGGCCGCCCA GCGCCACCCC GACGTGATCC GCGCCATGGT CGAAGCCGGC
CACGAGATCT GCAGCCATGG CTACCGCTGG ATCGACTACC AGAACATGGA CGAGGCCCAG
GAGCGCGAGC ACATGCTCGA AGCCATCCGT ATCCTCACCG AACTCACCGG CGAGCGCCCG
CTGGGCTGGT ACACCGGCCG TACCGGCCCG AACACCCGCC GCCTGGTGAT GGAGGAAGGT
GGTTTCCTCT ATGACAGCGA CACCTACGAC GACGACCTGC CCTACTGGGA GCCGAACAAC
CCCACCGGCA AGCCGCACCT GGTGATCCCC TACACCCTGG ACACCAACGA CATGCGCTTC
ACCCAGGTAC AGGGCTTCAA CTGCGGCGAG CAGTTCTTCC AGTACCTGAA AGACGCCTTT
GATGTGCTGT ACGCCGAAGG CGCCGACGCA CCGAAAATGC TTTCCATCGG CCTGCACTGC
CGCCTGGTCG GCCGCCCGGC ACGCCTGGCT GCACTCAAGC GCTTCGTCGA TTACGCAAAA
AGTCATGACC AGGTCTGGTT CGCCCGTCGC GTGGATATCG CCCGCCACTG GCACGCCACC
CACCCGTACA AGAATGAGAA CGCCTGA
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| Protein sequence | MSADYPRDLI GYGNNPPHPQ WPGNARIALS FVLNYEEGGE RNILHGDKES EAFLSEMVAA
QPLQGQRNMS MESLYEYGSR AGVWRLLKLF KDSGVPLTIF AVAMAAQRHP DVIRAMVEAG
HEICSHGYRW IDYQNMDEAQ EREHMLEAIR ILTELTGERP LGWYTGRTGP NTRRLVMEEG
GFLYDSDTYD DDLPYWEPNN PTGKPHLVIP YTLDTNDMRF TQVQGFNCGE QFFQYLKDAF
DVLYAEGADA PKMLSIGLHC RLVGRPARLA ALKRFVDYAK SHDQVWFARR VDIARHWHAT
HPYKNENA
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