Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4263 |
Symbol | |
ID | 1041800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4847911 |
End bp | 4848594 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637147661 |
Product | hypothetical protein |
Protein accession | NP_746379 |
Protein GI | 26990954 |
COG category | [S] Function unknown |
COG ID | [COG2836] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.88561 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCTGACC TGCTTGCGCT GCTGGGCTCG GCACTGGTCC TTGGCCTGCT AGGGGGCGGT CACTGCCTGG GCATGTGCGG TGGCCTGATG GGCGCACTAA CCTTGGCCAT CCCCCCCGAA CAACGCGGCA AGCGCCTGCG CCTGTTGCTG GCGTACAACC TGGGGCGCAT TTTCAGCTAT GCCTGCGCCG GCCTGTTGCT GGGCCTGGCC GGCTGGGCCG TGGCCAGCAG CCCGGCAGCG CTGGCGCTGC GGGTGGTCGC GGCACTGCTG CTGATTGCCA TGGGCCTGTA CCTGGCCGGC TGGTGGAGCG GGCTGACCCG TATCGAGGCA CTGGGCCGCG GGCTGTGGCG GCATATCCAG CCGGTGGCGT CGCGATTGCT GCCAGTGTCC AGCCTCCCTC GGGCATTGCT GCTGGGCGCC CTCTGGGGCT GGCTGCCGTG CGGGCTGGTG TACAGCACCC TGCTGTGGGC GGCCAGCCAG GGCAATGCCG GCTACAGCGC CGGGTTGATG CTGGCGTTCG GGGTGGGCAC CTGGCCGGTG TTGCTGGCAA CCGGGCTGGC TGCCGAACGG ATGAACGCCC TGTTGCGGCG ACGCAGCGTG CGAGTGGCAG GCGGTGTGCT GGTGATGCTA TTCGGTATCT GGACCCTGCC GGGCCCACAC CAGCACTGGC TGATGGGCCA TTGA
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Protein sequence | MPDLLALLGS ALVLGLLGGG HCLGMCGGLM GALTLAIPPE QRGKRLRLLL AYNLGRIFSY ACAGLLLGLA GWAVASSPAA LALRVVAALL LIAMGLYLAG WWSGLTRIEA LGRGLWRHIQ PVASRLLPVS SLPRALLLGA LWGWLPCGLV YSTLLWAASQ GNAGYSAGLM LAFGVGTWPV LLATGLAAER MNALLRRRSV RVAGGVLVML FGIWTLPGPH QHWLMGH
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