Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4255 |
Symbol | ccoN-2 |
ID | 1042804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4839634 |
End bp | 4841076 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637147653 |
Product | cbb3-type cytochrome c oxidase subunit I |
Protein accession | NP_746371 |
Protein GI | 26990946 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.438372 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACAG CAATCAGTCC GACTGCTTAT AACTATAAGG TCGTCCGCCA GTTCGCCATC ATGACGGTGG TCTGGGGGAT CCTTGGCATG GGCCTCGGCG TCTTCATCGC CTCGCAGCTG GTGTGGCCGC AGCTGAACCT GGACCTTCCC TGGACCAGCT TCGGCCGCCT GCGCCCGCTG CACACCAACC TGGTGATCTT CGCCTTCGGG GGCTGTGCGC TGTTCGGCAC CAGCTACTAC GTGGTGCAGC GCACCTGCCA GACCCGGCTG ATCTCCGACA GCATGGCCGC CTTCACCTTC TGGGGTTGGC AAGCCGTGAT CGTCGGCGCG CTGATCACCC TGCCGATGGG CTACACCACC ACCAAGGAAT ACGCCGAGCT GGAGTGGCCG CTGGCGATCC TGCTGGCCAT CGTCTGGGTT ACCTACGGGC TGGTGTTCTT CGGCACTATC GTCAAACGCA AGACCAAGCA CATCTATGTC GGCAACTGGT TCTACGGTGC GTTCATCGTG GTCACCGCGA TGCTGCACAT CGTCAACCAC ATCTCGCTGC CGGTGAGCCT GTTCAAGTCG TACTCGGCCT ACTCCGGCGC CACCGACGCG ATGATCCAGT GGTGGTACGG CCACAACGCC GTGGGCTTCT TCCTCACCAC CGGCTTCCTG GGGATGATGT ACTACTTCGT GCCCAAGCAG GCCGAGCGGC CGATCTACTC GTATCGCTTG TCGATCGTGC ACTTCTGGGC GCTGATCACC CTGTACATCT GGGCCGGCCC GCATCACCTG CACTACACCG CCCTGCCTGA CTGGGCGCAG TCGCTGGGCA TGGTAATGTC GATCATCCTG CTGGCGCCAA GCTGGGGCGG CATGATCAAC GGCATGATGA CCCTGTCGGG CGCCTGGCAC AAACTGCGCA CCGACCCGAT CCTGCGCTTC CTGGTGGTGT CGCTGGCGTT CTACGGCATG TCCACCTTCG AAGGCCCGAT GATGGCCATC AAGACCGTGA ACTCACTGTC GCACTACACC GACTGGACCA TCGGCCACGT CCACGCCGGC GCCCTCGGCT GGGTGGCAAT GATTTCGATC GGCGCCGTGT ACCACATGAT CCCGAAACTC TACGGCCGCG AGCAGATGCA CAGCATCGGC CTGATCAACG CGCACTTCTG GCTGGCCACC ATCGGTACCG TACTGTACAT CGCCTCGATG TGGGTCAACG GCATCACCCA GGGCCTGATG TGGCGCGCCA TCAACGATGA CGGCACCCTC ACCTACTCCT TCGTCGAAGC CCTGCAGGCC AGCCACCCCG GCTACATCGT CCGCGCCCTG GGCGGAGCGT TCTTCGCCAG CGGCATGCTG CTGATGGCCT ACAACGTGTT CCGTACCGTA CGTGCCGCCA ACCCGGCACA GGCTGAAGAG GCCGCCAAGA TCGTCGTTGT GGGAGCGCAC TGA
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Protein sequence | MSTAISPTAY NYKVVRQFAI MTVVWGILGM GLGVFIASQL VWPQLNLDLP WTSFGRLRPL HTNLVIFAFG GCALFGTSYY VVQRTCQTRL ISDSMAAFTF WGWQAVIVGA LITLPMGYTT TKEYAELEWP LAILLAIVWV TYGLVFFGTI VKRKTKHIYV GNWFYGAFIV VTAMLHIVNH ISLPVSLFKS YSAYSGATDA MIQWWYGHNA VGFFLTTGFL GMMYYFVPKQ AERPIYSYRL SIVHFWALIT LYIWAGPHHL HYTALPDWAQ SLGMVMSIIL LAPSWGGMIN GMMTLSGAWH KLRTDPILRF LVVSLAFYGM STFEGPMMAI KTVNSLSHYT DWTIGHVHAG ALGWVAMISI GAVYHMIPKL YGREQMHSIG LINAHFWLAT IGTVLYIASM WVNGITQGLM WRAINDDGTL TYSFVEALQA SHPGYIVRAL GGAFFASGML LMAYNVFRTV RAANPAQAEE AAKIVVVGAH
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