| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4253 |
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| Symbol | ccoP-1 |
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| ID | 1041688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 4838236 |
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| End bp | 4839177 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637147651 |
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| Product | cytochrome c oxidase, cbb3-type, subunit III |
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| Protein accession | NP_746369 |
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| Protein GI | 26990944 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.49464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCT TCTGGAGTAC GTACATCAGC GTACTGACCA TCGGTAGCCT GATTGGCCTG
ACCTGGCTGC TGCTCGCCAC GCGCAAGGGC CAGAGCAACA ACACCACCGA CGAGACCATG
GGCCACAGCT TCGACGGCAT AGAGGAGTAC GACAACCCGC TGCCCAAGTG GTGGTTCTGG
CTGTTCGTTG GCACCTTGGC GTTCTCGGTC GGCTACCTGA TCCTCTACCC AGGCCTGGGC
AACTGGAAAG GCATCCTGCC GGGCTATGAA AATGGCTGGA CTGGCGCCAA TGAATGGCAG
AAGGAAATGG ACAAGGCCGA TGCCAGGTTC GGTCCGATCT TCGCCAAATA CGCCGCCATG
CCCGTAGAAG AAGTGGCGAA GGACCCGCAG GCGCTGAAAA TGGGCAGCCG CCTGTTTGCC
TCCAACTGCT CGGTGTGCCA CGGTTCCGAC GCCAAGGGCG CCTTCGGCTT CCCCAACCTC
ACCGACAATG ACTGGCGCTG GGGCGGCGAT CCGGAAACCA TCAAGACCAG CATCATGAGC
GGTCGCCATG GCGTGATGCC GGCCTGGGCC GAAGTGATCG GTGACCAGGG CGTGGCCGAT
GTGGCTGCGT TCGTGGTCAG CAAACTCGAT GGCCGCACAC TGCCTGAGGG CGCGAAGGCC
GATGTGGAGA ACGGGCAGAA GATCTTCGCA GCCAACTGCG TGGCCTGCCA CGGGCCGGAA
GGCAAAGGTA CGCCCGCCAT GGGCGCTCCG AACCTGACCC ATCCGCAGGC GTTTATCTAC
GGTTCGAGCT TTGCCCAGCT GCAGCAGACC ATTCGTTATG GTCGCCAGGG GCAAATGCCG
GCGCAGGCCG AGATCCAGGG GAATGACAAG GTGCACCTGC TGGCGGCTTA CGTGTATAGC
CTGTCGCAGG ATGGTTCGGC TGAGGCTGTG ACGGCCAAGT GA
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| Protein sequence | MTTFWSTYIS VLTIGSLIGL TWLLLATRKG QSNNTTDETM GHSFDGIEEY DNPLPKWWFW
LFVGTLAFSV GYLILYPGLG NWKGILPGYE NGWTGANEWQ KEMDKADARF GPIFAKYAAM
PVEEVAKDPQ ALKMGSRLFA SNCSVCHGSD AKGAFGFPNL TDNDWRWGGD PETIKTSIMS
GRHGVMPAWA EVIGDQGVAD VAAFVVSKLD GRTLPEGAKA DVENGQKIFA ANCVACHGPE
GKGTPAMGAP NLTHPQAFIY GSSFAQLQQT IRYGRQGQMP AQAEIQGNDK VHLLAAYVYS
LSQDGSAEAV TAK
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