| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4251 |
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| Symbol | ccoO-1 |
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| ID | 1041937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 4837431 |
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| End bp | 4838039 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637147649 |
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| Product | cbb3-type cytochrome c oxidase subunit II |
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| Protein accession | NP_746367 |
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| Protein GI | 26990942 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit |
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| TIGRFAM ID | [TIGR00781] cytochrome c oxidase, cbb3-type, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.806894 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACATG AAGTCATCGA GAAAAACGTC GGCCTGATGG CCCTGCTGAT GGTATTTGCC
GTCAGCATCG GCGGCCTGAC CCAGATCGTC CCGCTGTTCT TCCAGGACGT CACCAACAAA
CCGGTCGAAG GCATGAAGCC CTACACCGCG CTGCAACTGG AAGGCCGCGA TGTCTACATC
CGCGAAGGTT GCGTGGGCTG TCACTCGCAG ATGATCCGCC CGTTCCGCGC CGAAACCGAG
CGTTACGGCC ACTACTCGGT GGCCGGTGAA AGCGTGTGGG ACCACCCGTT CCTGTGGGGC
TCCAAGCGCA CTGGGCCGGA CCTGGCCCGA GTCGGTGGCC GCTACTCGGA CGACTGGCAC
CGTGCGCACC TGTACAACCC GCGCAACGTG GTGCCGGAGT CGAAGATGCC GTCCTACCCG
TGGCTGGTTG CCCAGCCGGT CGACAACAGC CACACCGACG TCAAGATGCG CACCCTGCGC
ACCCTGGGCG TGCCGTACAC CGACGACGAC ATTGCCGGCG CCCGTGAAGC GGTCAAAGGC
AAGACCGAGA TGGATGCACT GGTCGCCTAC CTGCAGGTGC TCGGCACCGC GATCAAGAAC
AAGAGGTGA
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| Protein sequence | MKHEVIEKNV GLMALLMVFA VSIGGLTQIV PLFFQDVTNK PVEGMKPYTA LQLEGRDVYI
REGCVGCHSQ MIRPFRAETE RYGHYSVAGE SVWDHPFLWG SKRTGPDLAR VGGRYSDDWH
RAHLYNPRNV VPESKMPSYP WLVAQPVDNS HTDVKMRTLR TLGVPYTDDD IAGAREAVKG
KTEMDALVAY LQVLGTAIKN KR
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