Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4250 |
Symbol | ccoN-1 |
ID | 1047010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4835993 |
End bp | 4837417 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637147648 |
Product | cbb3-type cytochrome c oxidase subunit I |
Protein accession | NP_746366 |
Protein GI | 26990941 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACACAA CCAGCAGTAC CGCCTATAAC TACAAGGTGG TCCGCCAATT CGCCATCATG ACGGTGGTGT GGGGAATCGT CGGGATGGGG CTCGGCGTCT TCATCGCCGC CCAGCTCGCC TGGCCGTCCC TAAACTTCGA CCTCCCCTGG ACCAGCTTCG GCCGCCTGCG CCCCCTGCAT ACCAATGCGG TGATCTTCGC GTTCGGCGGC TGCGCACTGT TCGCCACCTC CTATTATTCG GTGCAACGCA CCTGCCAGAC CACCCTGTTT GCACCGGGCC TGGCCGCGTT CACGTTCTGG GGCTGGCAAC TGGTTATCCT GCTGGCGGCC ATCAGCCTGC CGCTGGGCTA CACCAGCTCC AAGGAATACG CCGAACTGGA ATGGCCGATC GACATTCTGA TCACCATCGT CTGGGTGGGC TACGCCATCG TGTTCTTTGG CACGCTGATG AAGCGCAACA CCAAACACAT CTACGTCGGC AACTGGTTCT TCGGCGCCTT CATCCTGACC GTGGCACTGC TGCACATCGT CAACAACCTG GAGCTGCCGG TCAGCCTGAC CAAATCCTAT TCGGTCTACG CTGGCGCCAC CGATGCCATG GTGCAATGGT GGTACGGCCA TAACGCGGTG GGCTTCTTCC TGACCGCAGG CTTCCTGGGG ATGATGTACT ACTACGTGCC CAAGCAGGCC GAACGGCCGG TGTATTCGTA TCGCTTGTCG ATCGTGCACT TCTGGGCGCT GATCACCCTG TACATCTGGG CCGGCCCGCA CCACTTGCAC TACACCGCCC TGCCCGATTG GGCGCAGTCG CTGGGCATGG TGATGTCGCT GATCCTGCTG GCGCCAAGCT GGGGCGGCAT GATCAACGGC ATGATGACCC TGTCGGGCGC CTGGCACAAA CTGCGCAGCG ACCCGATCCT TCGCTTCCTG GTGGTGTCAC TGGCGTTCTA CGGCATGTCC ACCTTCGAAG GCCCGATGAT GGCCATCAAG ACGGTCAACG CCCTGTCCCA CTACACCGAC TGGACCATCG GCCACGTCCA CGCCGGCGCC CTCGGCTGGG TAGCGATGAT CTCGATCGGC GCGCTGTACC ACACCATCCC CAAAGTGTTC GGCAAAGAAC GCATGTACAG CCTCGGCCTG ATCAATGCGC ACTTCTGGCT GGCCACCATC GGTACCGTGC TGTACATCGC CTCGATGTGG GTCAACGGCA TCGCCCAGGG CCTGATGTGG CGCGCGGTCA ACAGCGACGG CACGCTCACC TACTCGTTCG TGGAAACCTT GGTGGCCAGC CACCCAGGCT TCGTCGTGCG CTTCGTCGGC GGCGCGATCT TCCTCAGCGG CATGTTCCTG ATGGCCTGGA ACACCTGGCG CACCGTGCGT TCGCCAGCGC TTGACGTCGC CCCTGCGAAC GCCCAGTTGG CTTGA
|
Protein sequence | MNTTSSTAYN YKVVRQFAIM TVVWGIVGMG LGVFIAAQLA WPSLNFDLPW TSFGRLRPLH TNAVIFAFGG CALFATSYYS VQRTCQTTLF APGLAAFTFW GWQLVILLAA ISLPLGYTSS KEYAELEWPI DILITIVWVG YAIVFFGTLM KRNTKHIYVG NWFFGAFILT VALLHIVNNL ELPVSLTKSY SVYAGATDAM VQWWYGHNAV GFFLTAGFLG MMYYYVPKQA ERPVYSYRLS IVHFWALITL YIWAGPHHLH YTALPDWAQS LGMVMSLILL APSWGGMING MMTLSGAWHK LRSDPILRFL VVSLAFYGMS TFEGPMMAIK TVNALSHYTD WTIGHVHAGA LGWVAMISIG ALYHTIPKVF GKERMYSLGL INAHFWLATI GTVLYIASMW VNGIAQGLMW RAVNSDGTLT YSFVETLVAS HPGFVVRFVG GAIFLSGMFL MAWNTWRTVR SPALDVAPAN AQLA
|
| |