| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4244 |
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| Symbol | pfrI |
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| ID | 1041651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 4831494 |
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| End bp | 4832024 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637147642 |
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| Product | extracytoplasmic-function sigma-70 factor |
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| Protein accession | NP_746360 |
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| Protein GI | 26990935 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.799752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGAAC AACTATCCAC AAGTAAGTGC GATTCACCAT TACTGCAGGC CTTCGTCGAC
AACCGCAGCA TCCTGGTCAA GATCGCCGCC CGTATCACAG GCTGCCGTTC ACGCGCTGAG
GACGTGGTAC AGGATGCCTT TTTCCGGCTC AGCACCGCCC CGCAGATCAC CTCATCGTTC
AAGGCCCAGC TGAGCTACCT GTTCCAGATC GTGCGCAACC TGGCGATCGA CCACTATCGC
AAGCAGGCGA TGGAGCTGAA GTACTCCGGT AGTGAAGAGG AAGGCATGAA CGTGGTGGTG
CAGAACGCCT CGCCCGAAGC CACCCACATA AACCGCGCCG CGCTGAATGA CATCGCGGAG
GCCTTGAACG AACTGCCGCC GCGCACCCGC TATGCTTTCG AGATGTACCG CCTTAATGGC
GTGCCGCAGA AGGACATTGC CAAGGAACTG GGCGTATCGC CGACCTTGGT CAACTTCATG
ATCCGCGATG CGCTGGTGCA TTGCCGCAAG ACGGCCAGTC GCCAGGCCTG A
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| Protein sequence | MAEQLSTSKC DSPLLQAFVD NRSILVKIAA RITGCRSRAE DVVQDAFFRL STAPQITSSF
KAQLSYLFQI VRNLAIDHYR KQAMELKYSG SEEEGMNVVV QNASPEATHI NRAALNDIAE
ALNELPPRTR YAFEMYRLNG VPQKDIAKEL GVSPTLVNFM IRDALVHCRK TASRQA
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