| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4210 |
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| Symbol | |
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| ID | 1042503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 4754760 |
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| End bp | 4756724 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637147609 |
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| Product | efflux ABC transporter ATP-binding protein |
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| Protein accession | NP_746327 |
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| Protein GI | 26990902 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component
[COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.875938 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACGC CCCTGATCGA GCTCTGTGAC ATCCGTAAAG CGTACGGCGG CGTCGACACC
CCCAGGGTAG AAGTCCTGCG CGGCATCAGC CTGCGCGTGC ATGCCGGCGA ATTCGTCGCC
ATCGTCGGCG CCTCCGGCTC CGGCAAGTCG ACCCTGATGA ATATCCTCGG CTGCCTCGAT
CGCCCAAGTG CCGGCAGCTA CCGCTTCGCC GGCAAGGACG TTGCCGAGCT GGACAGCGAC
GAACTGGCCT GGCTGCGCCG CGAGGCCTTC GGGTTCGTGT TCCAGGGCTA CCACCTGATC
CCCTCCGGCT CAGCCCAGGA AAACGTCGAG ATGCCAGCCA TCTACGCCGG TACCCCAGCC
GCCGAACGCC AGGCCCGCGC CAGCGCCCTG CTCGGCCGCC TGGGCCTGGC CAGCCGCACC
GCCAACCGTC CGCATCAATT ATCCGGTGGC CAGCAGCAAC GGGTCTCGAT TGCCCGGGCC
TTGATGAACG GTGGCCACAT CATCCTGGCC GACGAACCAA CCGGCGCCCT CGACAGCCAT
AGCGGCGCCG AGGTGATGGC GCTGCTCGAC GAGCTGGCCA GCCAGGGCCA TGTAATCATC
CTCATCACCC ACGACCGCGA AGTGGCTGCC CGGGCGCACC GGGTTATCGA GATTCGCGAC
GGCTTGGTGA TCAGTGACTC CGCCGCCGAC CAGCCGCCCG CCCATGCCCA CAAAGGCATA
CAGGCAGAAG AACTGCGCCA GCGCCTGGAC CGTGGTGCAA CCCAGCACGG TGCCTGGAAA
GGTGAACTGC TCGAATCGCT GCAGGCGGCA TGGCGAGTGA TGTGGATCAA CCGCTTCCGC
ACGGCACTGA CCCTGCTCGG AATCATCATC GGAGTCGCGT CGGTGGTGGT GATGTTGGCT
GTCGGTGAAG GCAGCAAACG CCAGGTAATG GCACAGATGG CCGCCTTCGG CTCCAACATC
CTATACCTCA ATGGCAGCCC CCCGACCCTG CGCGAACCGG CTGGGCGCAT CACCCTGGAC
GATGTTGCGG CGATCGGTGA GCTTCCGCAG GTCAAACACA TCATGCCGGT GCTCGGCGAA
AAGATGATGG TCCGCCACGG CAACAACAGC CAGCAATTCT ACGTGGGCGG CAACAACACC
TTTTTCCCGG AGATTTTCAA CTGGCCGGCC GTTGAAGGCA GCTTTTTCAC CGAGACCGAC
GAGGCCAGTA GCGCAGCGGT GGCTGTGATC GGCCAGAAAG TCCGGGAAAA GATGCTTGCC
CCTGGCAGCA ACCCTATCGG CCAGTACCTA CTGATCGGCA ATGTACCGTT CCAAGTGGTC
GGCATCCTTG CCGGCAAAGG CGCCAGCTCC GGCGATCAGG ACAGCGACGG GCGCATCGTG
GTGCCATTTT CGGCAGCGGC CATCCGCCTG TTCGGCCACC GCGACCCGGA CTATATCGCC
ATTGCCGCGC GCGACTCAGG CCAGGTCAAG GACACCGAAG CGGCCATCGA CCGCCTGCTG
CGCCAGCGCC ACCAGGGCAA ACACGATTTC GAGCTGACCA ACGATGCCGC CCTGATCCAG
GCCGAGGCGC GCACGCAGAA CAGCCTGTCG TTGATGCTCG GGGCCATTGC CGCCATCTCG
CTGCTGGTCG GCGGTATCGG AGTGATGAAC ATCATGCTCA TGACCGTGCG CGAGCGCACC
CGTGAAATCG GTATCCGCAT GGCCACCGGC GCCCGCCAGC GCGACATCCT CCGGCAGTTC
CTGAGCGAGG CGATCATGCT GTCGATGGTT GGCGGCCTGA CCGGCATCGC CCTGGCCCTG
GTGGTCGGCG CCAGCCTTAC CCTGGCCGAC ATTGCCGTGG CGTTCGCCCT GCCTGCCATT
GTTGGCGCAT TTGCCTGCGC CGTCATCACT GGGGTGGTGT TTGGTTTCAT GCCAGCACGC
AAGGCTGCAC GCCTTGACCC GGTCAAAGCC CTTACCAGCG AATAG
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| Protein sequence | MATPLIELCD IRKAYGGVDT PRVEVLRGIS LRVHAGEFVA IVGASGSGKS TLMNILGCLD
RPSAGSYRFA GKDVAELDSD ELAWLRREAF GFVFQGYHLI PSGSAQENVE MPAIYAGTPA
AERQARASAL LGRLGLASRT ANRPHQLSGG QQQRVSIARA LMNGGHIILA DEPTGALDSH
SGAEVMALLD ELASQGHVII LITHDREVAA RAHRVIEIRD GLVISDSAAD QPPAHAHKGI
QAEELRQRLD RGATQHGAWK GELLESLQAA WRVMWINRFR TALTLLGIII GVASVVVMLA
VGEGSKRQVM AQMAAFGSNI LYLNGSPPTL REPAGRITLD DVAAIGELPQ VKHIMPVLGE
KMMVRHGNNS QQFYVGGNNT FFPEIFNWPA VEGSFFTETD EASSAAVAVI GQKVREKMLA
PGSNPIGQYL LIGNVPFQVV GILAGKGASS GDQDSDGRIV VPFSAAAIRL FGHRDPDYIA
IAARDSGQVK DTEAAIDRLL RQRHQGKHDF ELTNDAALIQ AEARTQNSLS LMLGAIAAIS
LLVGGIGVMN IMLMTVRERT REIGIRMATG ARQRDILRQF LSEAIMLSMV GGLTGIALAL
VVGASLTLAD IAVAFALPAI VGAFACAVIT GVVFGFMPAR KAARLDPVKA LTSE
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