Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4206 |
Symbol | |
ID | 1042492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 4750846 |
End bp | 4752171 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637147605 |
Product | major facilitator family transporter |
Protein accession | NP_746323 |
Protein GI | 26990898 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGCCA TCGATACCGC TCGCCCGCCC CGGTTCAGCC GCGGCGACCA TCGGACCCTG GGCCTGGCGG CGCTGGGCGG CGCGCTGGAA ATCTACGACT TCATCATTTT CGTGTTCTTC GCGCTGACCC TCAGCCAGCT GTTCTTCCCG CCCGAGATGC CCGAATGGCT GCGCCTGCTG CAAAGCTTCG GCATTTTCGT CACCGGCTAC CTGGCGCGGC CGCTGGGCGG CATCCTGATG GCGCACTTCG CCGACCATCT GGGGCGCAAG CGGGTATTCA GCCTGAGCAT CCTGATGATG GCCCTGCCGT GTCTGCTGAT CGGTGTGATG CCGACCTATG CCGACATCGG CTATGCCGCC CCGCTGATCC TGTTGGCCTT GCGCATCCTC CAGGGGGCTG CCGTAGGCGG TGAGGTGCCA AGCGCCTGGA CGTTCGTTGC CGAGCACGCG CCCAACGGGC GGCGCGGCTA TGCCCTGGGC TTTCTGCAGG CCGGGCTGAC TTTCGGCTAC CTGCTGGGGG CGCTGACCGC AACTTTGCTG GCGCAACTGT TCACCCCGCA GGAAATCCTC GATTACGCCT GGCGCTACCC GTTCCTGTTG GGTGGGGTGT TTGGTGTGAT TGGTGTGTGG CTGCGCCGCT GGCTCAGTGA AACACCGGTG TTCCTCGCCC TGCGCGCGCG CCAGGAGCAA CCTGTGACGT TTCCGCTGCG GCAAGTGCTG GGCGAGCACC GCCGGGCGTT GATCCCTGCT GCGTTGCTGA CCTGTGTGCT GACCTCGGCG GTGGTGGTGC TGGTGGTGAT CACGCCGACG GTGATGCAGC AGCGTTTCGG CATGAGTGCC GGGCACACCT TCGCCCTGAG CAGCGTGGGC ATCGTCTTCC TCAACATTGG CTGCGTGCTG GCCGGGCTGC TGGTCGACCG TGTGGGTGCC TGGCGCGCGC TGATGCTGTA TAGCCTGTTG CTGCCGCTGG GTATCGGCGC GTTGTACGCC AGCCTGGTGG GGCAGTGGGG CATGACCTGG CTGGCCTATG CGCTGGCGGG GTTGAGCTGC GGCGTGGTGG GGGTGGTGCC CTCGGTGATG GTGGGGCTGT TCCCGGCGCA GATCCGGGTA TCGGGCATTT CCTTCACCTA CAACGTGGCC TACGCACTGT GGGCCAGTAC CACGCCGTTG GCACTGATTG CGCTGATGCC GTGGAGCCCA TGGGTGTGTG TCGGGTTTTG TCTGATCATG GGCGCGGTGG GGCTGCTGAC GGCCCTGTAT TTCGGGCGTC GTGAGCCATT GGTGTTTGCG GCGGAGCCGA TACCGGTCAT GTGCGGCGAC AAATGA
|
Protein sequence | MTAIDTARPP RFSRGDHRTL GLAALGGALE IYDFIIFVFF ALTLSQLFFP PEMPEWLRLL QSFGIFVTGY LARPLGGILM AHFADHLGRK RVFSLSILMM ALPCLLIGVM PTYADIGYAA PLILLALRIL QGAAVGGEVP SAWTFVAEHA PNGRRGYALG FLQAGLTFGY LLGALTATLL AQLFTPQEIL DYAWRYPFLL GGVFGVIGVW LRRWLSETPV FLALRARQEQ PVTFPLRQVL GEHRRALIPA ALLTCVLTSA VVVLVVITPT VMQQRFGMSA GHTFALSSVG IVFLNIGCVL AGLLVDRVGA WRALMLYSLL LPLGIGALYA SLVGQWGMTW LAYALAGLSC GVVGVVPSVM VGLFPAQIRV SGISFTYNVA YALWASTTPL ALIALMPWSP WVCVGFCLIM GAVGLLTALY FGRREPLVFA AEPIPVMCGD K
|
| |