| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4197 |
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| Symbol | |
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| ID | 1043480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 4742399 |
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| End bp | 4743991 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637147596 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | NP_746314 |
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| Protein GI | 26990889 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGGCCTG TTTTATGTCG GTTTAATCGT TTCGATAGCT GTCACGCTGT TGTATTGTCG
ACTACGTTGC AATCTGTCCC AGTACACTTT GCAACTGTTA CGGTATCCTC TACCGTCAGT
GACCCGTACA AGAACAACGA GCATGTCGAC ATGACCAACC TGCTGCTGTA CCAGCGTATC
GCCCAGCAAC TGGCCGATGA TATCCGTCGC GGTGTCTACC AGCCAGGCGA GCGGGTACCC
TCCGTGCGCA AGATGAGCGC CCAGCTCAAT GTCAGCCATG CCACGGTGTT GCAGGCCTAT
GCCAATCTCG AGGACCAAGG GCTTATCCGG GCGCGGCCGC AGTCTGGCTA TTACGTGCAC
CAGACCCCTG CCTTGACCGC GCAAACCCCC GACATCGCTC GGGTGGAGCG CCCGGGCCTG
GTCACGCGCG CCAGCATCAT CCAGCAGGTG CTGACTGAGG CGCGCCGCGA TGGTGTGTTC
CCGTTTGGTG CTGCTGTGCC GCATGTCGAC TACCTGCCAG TGCGCGCCCT GCATCAGCAA
ATCGCCAAGG TGACGCGCTT TCATAGCCCG CGCGCCTTCA GTTACATGTT CAGCCCCGGT
TTCGAGCCGC TGCGCCGACA GATCGCCATA CGCATGCGCG ATGCCGGCGT GCTGGTCGAC
CCGCGCGAAG TGATCGTGAC CCATGGGTGT GTCGATGCCC TGCAGATGTC GCTGCGGGTG
CTGACCCGCC CAGGTGACCT GATCGCCGCC GAGTCACCGA CCTACTACGG CTTGCTGCAG
CTGGCTGACC TGCTGGGTTT GAAAGTGATC GAAATCCCCA GTGACCCGTC CACCGGTATC
AGCCTCGAAG CCTTGCAACT GGCGGCTAAC CAATGGTCGA TCAAGGCGCT GGTGCTCACT
GCCCGCTTGA GCAATCCGCT GGGCGGCACC GTTCCCGAAG AGCGGCAAAA GCAATTGCTG
CGCCTGGCCT CGGACTTCGA TATCCAGATC ATCGAGGATG ACATCTACGG TGAGCTGATG
TTCGAGCAAG GCAAGACCAA GGCGCTGAAG GCGTTCGACC GGCTGGACCG GGTGATCTAC
TGTTCGAGCT TCTCCAAGAC CCTGTCCCCT GGCGTGCGGG TGGGCTGGAT GATCGCAGGG
CGTTACCAGG ACGAGATTCA GCGCCTGCAG ACTTTTACCA CCCACTCGGC CTGTAGCGTG
ACGCAGATGG GCGTGGCAGC CTACCTGGAA AATGGCGGCT ACGACCGGCA TCTGCGCTAC
ATACGCCAGG AATATCGCAA GAACCTCAGT GCCTACCAGC TGGCAGTGCA GCAGCACTTC
CCCGAGGGTA CCCAGATGAC CCGGCCGACA GGCGGCTTCA TCCTCTGGGT GAGCCTGCCC
GGTCGGGTCA ATACCCAGGA GCTGCATGTG CGCGCGCTGG AGCAGGGCAT CAGCATTGCA
CCAGGACTGA TATTCAGTAA CACAGAGCAG TTCAACCACT GTGTCCGACT CAATTGCGGC
ATACCTTGGA ATAAAGAGGC CGAGCGGGCT GTGATTACGC TCGGTTTGCT GGCGCAGCAG
TTGTGCAGGG AGACTGCGGT CACGCTGTTG TAA
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| Protein sequence | MRPVLCRFNR FDSCHAVVLS TTLQSVPVHF ATVTVSSTVS DPYKNNEHVD MTNLLLYQRI
AQQLADDIRR GVYQPGERVP SVRKMSAQLN VSHATVLQAY ANLEDQGLIR ARPQSGYYVH
QTPALTAQTP DIARVERPGL VTRASIIQQV LTEARRDGVF PFGAAVPHVD YLPVRALHQQ
IAKVTRFHSP RAFSYMFSPG FEPLRRQIAI RMRDAGVLVD PREVIVTHGC VDALQMSLRV
LTRPGDLIAA ESPTYYGLLQ LADLLGLKVI EIPSDPSTGI SLEALQLAAN QWSIKALVLT
ARLSNPLGGT VPEERQKQLL RLASDFDIQI IEDDIYGELM FEQGKTKALK AFDRLDRVIY
CSSFSKTLSP GVRVGWMIAG RYQDEIQRLQ TFTTHSACSV TQMGVAAYLE NGGYDRHLRY
IRQEYRKNLS AYQLAVQQHF PEGTQMTRPT GGFILWVSLP GRVNTQELHV RALEQGISIA
PGLIFSNTEQ FNHCVRLNCG IPWNKEAERA VITLGLLAQQ LCRETAVTLL
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