Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4187 |
Symbol | lpdG |
ID | 1042391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 4730006 |
End bp | 4731442 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637147586 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | NP_746304 |
Protein GI | 26990879 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.265886 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGA AATTCGACGT AGTGGTAATC GGTGCAGGCC CAGGCGGCTA TGTGGCTGCC ATCAAGGCTG CCCAACTTGG TCTGAAGACT GCCTGTATCG AGAAGTACAC CGACGCCGAG GGCAAACTGG CCCTGGGCGG CACCTGCCTG AACGTAGGTT GCATTCCTTC CAAGGCGCTG CTGGACAGCT CCTGGAAGTA CAAGGAAGCC AAAGAGAGCT TCAACGTCCA CGGTATCTCC ACGGGCGAAG TGAAGATGGA CGTCGCCGCG ATGGTTGGCC GCAAGGCCGG CATCGTCAAG AACCTGACCG GTGGCGTTGC CACCCTGTTC AAGGCCAACG GCGTCACTTC GATCCAGGGC CACGGCAAGC TGCTGGCCGG CAAGAAAGTC GAAGTCACCA AGGCTGACGG CACCACCGAA GTCATCGAAG CCGAGAACGT GATCCTGGCT TCCGGCTCGC GCCCGATCGA CATTCCGCCG GCCCCGGTCG ACCAGAACGT CATCGTCGAC TCCACCGGCG CCCTGGAATT CCAGGCCGTA CCGAAGCGCC TGGGCGTTAT CGGTGCAGGC GTGATCGGCC TGGAGCTGGG TTCGGTATGG GCTCGCCTGG GTGCTGAAGT GACCGTCCTG GAAGCCCTGG ACACCTTCCT GATGGCTGCC GACACCGCCG TGTCGAAAGA AGCCCAGAAG ACCCTGACCA AGCAAGGCCT GGACATCAAG CTGGGCGCTC GCGTCACCGG CTCGAAAGTC AACGGCAATG AAGTCGAAGT GACCTACACC AACGCCGAAG GCGAGCAGAA GATCACCTTC GACAAGCTGA TTGTTGCAGT CGGCCGTCGC CCGGTGACCA CCGATCTGCT GGCTTCCGAC AGCGGCGTGA CCATCGACGA GCGTGGCTAC ATCTTCGTCG ACGATTACTG CGCCACCAGC GTTCCGGGCG TGTACGCCAT CGGTGACGTG GTACGCGGTA TGATGCTGGC CCACAAGGCT TCGGAAGAGG GCATCATGGT CGTCGAGCGC ATCAAGGGCC ACAAGGCCCA GATGAACTAC GACCTGATCC CGTCGGTCAT CTACACCCAC CCGGAAATCG CGTGGGTCGG CAAGACCGAA CAGGCCTTGA AGGCCGAGGG CGTTGAGGTT AACGTGGGCA CCTTCCCGTT CGCGGCCAGC GGCCGTGCGA TGGCTGCCAA CGACACCGGT GGTTTCGTCA AGGTCATCGC CGATGCCAAG ACCGACCGCG TTCTGGGTGT TCACGTGATT GGCCCATCGG CTGCCGAACT GGTGCAGCAG GGCGCAATCG CAATGGAATT CGGCACCAGT GCCGAGGATC TGGGCATGAT GGTCTTCAGC CATCCAACCC TGTCCGAAGC GTTGCATGAA GCAGCGCTGG CGGTGAATGG CGGCGCCATT CACGTGGCCA ACCGTAAGAA GCGTTAA
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Protein sequence | MTQKFDVVVI GAGPGGYVAA IKAAQLGLKT ACIEKYTDAE GKLALGGTCL NVGCIPSKAL LDSSWKYKEA KESFNVHGIS TGEVKMDVAA MVGRKAGIVK NLTGGVATLF KANGVTSIQG HGKLLAGKKV EVTKADGTTE VIEAENVILA SGSRPIDIPP APVDQNVIVD STGALEFQAV PKRLGVIGAG VIGLELGSVW ARLGAEVTVL EALDTFLMAA DTAVSKEAQK TLTKQGLDIK LGARVTGSKV NGNEVEVTYT NAEGEQKITF DKLIVAVGRR PVTTDLLASD SGVTIDERGY IFVDDYCATS VPGVYAIGDV VRGMMLAHKA SEEGIMVVER IKGHKAQMNY DLIPSVIYTH PEIAWVGKTE QALKAEGVEV NVGTFPFAAS GRAMAANDTG GFVKVIADAK TDRVLGVHVI GPSAAELVQQ GAIAMEFGTS AEDLGMMVFS HPTLSEALHE AALAVNGGAI HVANRKKR
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