Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4183 |
Symbol | |
ID | 1042394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 4725082 |
End bp | 4725831 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637147582 |
Product | hypothetical protein |
Protein accession | NP_746300 |
Protein GI | 26990875 |
COG category | [S] Function unknown |
COG ID | [COG3821] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.210399 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACTTCA TCCAAAGCAA CCTCAACAAC CTGCTGGCCA TCGCCTGGTT CGCCCTGTGC TGGGGTGGCT ATACCCGCTA TGCGATCTGG AAGGGGCGCG ACACCGCGTG CCTGGCCAGC GTGCTGCACT TGTACCGCGA AGACTGGATG CGCCGCATGC TGCTGCGCGA CAACCGCATC GCCGATGCCA GCGTGATCGG TAACCTGGAG CGCAACGCTT CGTTCTTCGC CTCCAGCACC CTGATCATTC TGGCTGGCAT CCTCACCGTG CTCGGTGCCT CCGACCGGGC ACTGTCATTG CTGGCCGACC TGCCGCTGGT TCAGCAAACA TCCCAGGGCA TGTCGGAGAT CAAGCTGCTG TGCCTGGCCA TGGTATTTGT CTATGCCTTC TTCACGTTCA GCTGGTGCAT GCGCCAATAC AACTTTGCCG CCGTGCTGGT GGGCTCGGCG CCGATGATCG GCGAACGGCT GGTCAATGAG CTGGAGCGCA AGGCGTTCGC CTCCCGCGCG GCACGGGTAT TGTCGTTGGC GGCTAACCAG TTCAACCTGG GGCTGCGTTC GTATTACTTC GGCATGGCCA TGTTGAGCTG GTTTATCAGC CCATGGTTGT TCATGGCGAT GAGTGTGGGA GTAGTGCTGA TTCTGTACCG TCGAGAGTTC CATTCGGATG TACTCGATGT GATGGTGTTC ACACCGACCG AAAGTGTACT GTCGGAGCCG GCCAAGGAAA GCTCGGTTGT TTCCAACTGA
|
Protein sequence | MNFIQSNLNN LLAIAWFALC WGGYTRYAIW KGRDTACLAS VLHLYREDWM RRMLLRDNRI ADASVIGNLE RNASFFASST LIILAGILTV LGASDRALSL LADLPLVQQT SQGMSEIKLL CLAMVFVYAF FTFSWCMRQY NFAAVLVGSA PMIGERLVNE LERKAFASRA ARVLSLAANQ FNLGLRSYYF GMAMLSWFIS PWLFMAMSVG VVLILYRREF HSDVLDVMVF TPTESVLSEP AKESSVVSN
|
| |