| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4158 |
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| Symbol | kdpD |
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| ID | 1042335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 4698031 |
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| End bp | 4700685 |
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| Gene Length | 2655 bp |
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| Protein Length | 884 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637147558 |
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| Product | osmosensitive K+ channel signal transduction histidine kinase |
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| Protein accession | NP_746276 |
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| Protein GI | 26990851 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.930921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACT CCGCCCGCGC CGATGCGCTG TTGGCCAACC TCCCACGCAC CGGCCGGGGC
CGGCTGAAGG TGTTCCTGGG CGCTGCCCCC GGCGTCGGCA AGACCTTCGC CATGCTCCAG
GCCGCACACG CCCAGCAACG CCAGGGCGTG CAGGTGTTGG CCGGGGTGGT CGAAACCCAT
GGCCGCGCCG AAACCGAAGC GTTGCTCGGA GGGCTGCATC AGCAGCCCTT GTTGCGCAGC
CAGTACCGTG GCGTCACCCT TGAGGAAATG GACCTTGACG GCCTGCTGCG TGCCGCGCCG
GCCTTGGCCC TGGTGGACGA ACTGGCCCAC ACGAACGCCC CCGGCAGCCG CCACGCCAAA
CGCTGGCAGG ATGTGCAAGA ACTCTTGGCC GCGGGCATCG ACGTGTACAC CACGGTCAAC
GTCCAGCACC TGGAAAGCCT CAACGACAAG GTCCGCGACA TTACCGGCGT GCAAGTGCGC
GAGACCCTGC CGGACTGGGT GCTGCAGGAA GCGTTCGAGC TGGTGCTGAT CGACCTGCCT
CCGCGAGAGC TGCTCGAACG CCTGCGTGAA GGCAAGGTGT ACGTGCCCGA GCAGGCAAGG
GCGGCCATCG ATGCGTATTT TTCGCAAACC AACCTCACCG CCCTGCGCGA GCTGGCCATG
CAGACCGCCG CTGCTCAGGT CGATGCCGAC CTGGCCCACG GCTATCGTCA GCGCGGCCAG
GAGGCGCCGG CCTTGCGCGG CCGGTTGCTG GTGGGCATAG ACGGTGACGA CCAGGCCGAA
CGCCTGGTGC GCCATGCCAG CCGCGTGGCC CAGCGCCGCC ACCTGCCCTG GAGCCTGGTG
CATGTGGACA ACGGCCGCCT GCGTGACGAA ACCGCACGGC ATCGTTTGCA AGCCGCGCAG
CAACTGGCCG AGCGACTGGG CGGGGAGGTG GTACTGCTGC GTGCTGGCGA AGTGGCCCGT
ACGCTGATCC AGCATGCTGT CGAGCGGCGG GCCAGCCTGG TGCTGGTCGG GCAGTCCCGC
AACCGCCTGC GTAGGCGTTT GTTCGGCGCG GGTGTGGCGG CGCGGCTGCT GCGCGAAAGC
CGTGGCCTGG AAATCAACGT GCTGGACCGC GACGTGCAGC CGCCAGCGCC GCGTTCAGCC
GTGCGGCGGG TGTGGGTGTG GCGTCATTAC CTGCTTGCGC TGCTGGCCAC CGTGATGGCT
GCGGGTCTGG CCTGGGCGGT GTCCAGTGTG CTCGCGTTGC CCAATATCTC GCTGGTGTTC
CTGGCGGCGG TGTTGCTGGT CGCGGTGCGC AGTAGCCTGG GACCTGCGCT GGCTTGCGCC
GCGCTGTCGT TCCTGGTCTA TGACTTCCTG TTCATACCGC CCAACTTCTC GTTCACCATC
CAGCGCGAAG AAGACGTGCT GACACTGGTG TTCTTTCTGT TGATGGCTGC GCTTACCGGC
AACCTGGCCG CGCGCCAGCG TCGCCAGTTG CAGGCGCTGC GCGAGACCCA GGCACAGACC
AGCCAGTTGC TCGACCTGTC TCGCCGGTTG ACGGTAGCCA CCGACCGCCA AGCCATATTC
AAGGCTGCCG GCCAGCACCT GGACGGGTGG CAGGACGCCC AGGTGTGCTT GCTGGAGCGC
AACGCCGAAG GCCAGTTGCA AGTGGCCAGC GGGGAAGCCT GCACCTTCAG CGACACCGAA
CGGGCGGCTG CCGATTGGGC CTGGCAGCAT GGGCAGGCCG CCGGTCACGG CAGCGATACC
CTGCCTAATG GCCGCTGGTG GTGGTGGCCA TTGGCGGTAG ACGATCAGCC GCTGGCGCTG
CTGGGTGTGC GCCCGCGCAA CGGGCAGCCG CTCAGCGACC CACGCCGGCG CCTGCTCACC
GCCCTAGGCC AGCCCCTGGC CCAGGCCCTG GCCCGCGCAC GCCTGGCTGA ACAGCTGGAA
GCCGCACGCC TGCACGGCGA AACCGAGCAA CTGCGCAGCG CCCTGCTGGC TTCCGTATCC
CATGACTTGC GCACGCCGTT GACCGCCATG CGTGGCAGCA TCGACAGCCT GTTGGCGTTG
GGCGATGCGA TCCCGGCTGA AGACCGCCGC GAGCTGCTGG AGGGCACCCG TAACGAAGCC
GAACGCCTCG ATCGCTACAT CCAGAACCTG CTGGACATGA CCCGCCTGGG CCATGGCGGC
CTCAAGCTGG CCCGCGACTG GGTGGCCCCG GCGGATATCG TCGGCAGTGC GCTCAACCGC
CTGCGGGTGG TGCTGGCGCC GCTGCGTGTG CACACGGACG TGCCGACCGA GCTGCCATTG
CTGTTCGTGC ATGCGGCGTT GATCGAGCAG GCACTGGTCA ACGTGCTGGA AAACGCCGCA
CGCTTTTCGC CGGCCAATGG TCGGCTTGAG CTGCAGGTGG CGGTGCATGA CGACCAACTG
CGCTTGACCG TCAGCGACCA GGGCCCCGGC ATTCCTGAAG CCGACCGCGA GAAAATCTTC
GATATGTTCT ACACCGCCGC CCGTGGCGAC CGCGGCGGGC AGGGTACCGG GCTGGGCCTG
GCTATCTGCC AGGGCATGAT CGGTGCCCAT GGCGGGCAGA TTCTGGTGGG CGAAGGCATT
GATGGCCAAG GCACCAGCAT CACTCTATGC TTGCCGCTGC CTCCTCAACC TGAAGCCGAA
AGCGAAACCC CATGA
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| Protein sequence | MSDSARADAL LANLPRTGRG RLKVFLGAAP GVGKTFAMLQ AAHAQQRQGV QVLAGVVETH
GRAETEALLG GLHQQPLLRS QYRGVTLEEM DLDGLLRAAP ALALVDELAH TNAPGSRHAK
RWQDVQELLA AGIDVYTTVN VQHLESLNDK VRDITGVQVR ETLPDWVLQE AFELVLIDLP
PRELLERLRE GKVYVPEQAR AAIDAYFSQT NLTALRELAM QTAAAQVDAD LAHGYRQRGQ
EAPALRGRLL VGIDGDDQAE RLVRHASRVA QRRHLPWSLV HVDNGRLRDE TARHRLQAAQ
QLAERLGGEV VLLRAGEVAR TLIQHAVERR ASLVLVGQSR NRLRRRLFGA GVAARLLRES
RGLEINVLDR DVQPPAPRSA VRRVWVWRHY LLALLATVMA AGLAWAVSSV LALPNISLVF
LAAVLLVAVR SSLGPALACA ALSFLVYDFL FIPPNFSFTI QREEDVLTLV FFLLMAALTG
NLAARQRRQL QALRETQAQT SQLLDLSRRL TVATDRQAIF KAAGQHLDGW QDAQVCLLER
NAEGQLQVAS GEACTFSDTE RAAADWAWQH GQAAGHGSDT LPNGRWWWWP LAVDDQPLAL
LGVRPRNGQP LSDPRRRLLT ALGQPLAQAL ARARLAEQLE AARLHGETEQ LRSALLASVS
HDLRTPLTAM RGSIDSLLAL GDAIPAEDRR ELLEGTRNEA ERLDRYIQNL LDMTRLGHGG
LKLARDWVAP ADIVGSALNR LRVVLAPLRV HTDVPTELPL LFVHAALIEQ ALVNVLENAA
RFSPANGRLE LQVAVHDDQL RLTVSDQGPG IPEADREKIF DMFYTAARGD RGGQGTGLGL
AICQGMIGAH GGQILVGEGI DGQGTSITLC LPLPPQPEAE SETP
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