Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4150 |
Symbol | |
ID | 1042321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4689119 |
End bp | 4690723 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637147550 |
Product | peptide ABC transporter, ATP-binding protein |
Protein accession | NP_746268 |
Protein GI | 26990843 |
COG category | [R] General function prediction only |
COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.971322 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAAC AGAACCTGAT CGAAGTGCGG GACCTGGCCG TGGAGTTCGT GACCGGGGAC CAGGTCAACC GGGTGGTGGA CGGCGTCAGC TTCGATATTC GCAAAGGCGA GACACTGGCC CTGGTGGGCG AAAGTGGCTC GGGCAAATCG GTCACCGCGC ACTCGATCCT GCGCCTGCTG CCCTATCCCC TGGCCCGGCA CCCCAGCGGC AGCATCCGCT ACGAAGGCAA GGACCTGCTG CAGCAGAGCG AGAAGACCCT GCAGCGCATT CGCGGCAACC GCATTGCGAT GATCTTCCAG GAGCCGATGA CCTCGCTCAA CCCGCTGCAT TGCATCGAAA AGCAGATCAA CGAAATCCTC CTGCTGCACA AGGGCCTGAC GGGCAAGGAA GCGACTGCGC GCACCCTGGA GTTGCTGGAT ATGGTCGGCA TTCCAGAGCC GCGCAAGCGC CTCAAGGCCC TGCCCCACGA ATTGTCGGGC GGCCAGCGCC AGCGGGTAAT GATCGCCATG GCGCTGGCCA ACGAGCCCGA GCTGCTGATT GCCGACGAGC CGACCACGGC GCTGGATGTG ACCGTGCAGC TGAAGATCCT CGAGCTGCTC AAGGAATTGC AGGCGCGTAT GGGCATGGCC CTGTTGCTGA TCAGCCATGA CCTGAACCTG GTGCGCCGCA TCGCTCACCG CGTGTGCGTG ATGCAGCGTG GGCAAATTGT CGAGCAAGCC GAATGCGCGA CGCTGTTCAG CTCGCCACAG CACCACTACA CACAGATGCT GATCAATGCC GAGCCCAGCG GGCTGCCGGC GCACAACCCG GTGGGCGCGC CGTTGCTGGA GGTGGATGAC CTCAAGGTCT GGTTCCCGAT CAAGAAGGGC TTTCTGCAGC GCACGGTCGA CCATGTGAAG GCGGTGGACG GGGTCAACTT CAGCTTGCCC CAGGGCCAGA CGCTGGGCAT TGTTGGCGAA TCCGGGTCGG GCAAGTCCAC ATTGGGCCTG GCGATCTTGC GGCTGATTTC CAGCCAGGGC GGCATTCGCT TTCATGGGCA GAACCTCGAA GGGCTGAACC AGAAAGCCGT GCGCCCCCTG CGGCGGGAAA TGCAGGTGGT GTTCCAGGAC CCGTTTGGCA GCCTGAGCCC GCGCATGTGC GTGGCGGACA TTGTCGGTGA AGGGCTGCGC ATTCACCGCA TTGGCACCGC GCAGGAACAG GAAGCGGCGA TTATCGCGGC CCTGGAGGAA GTAGGCCTGG ACCCGCGCAC CCGCCATCGC TACCCCCATG AGTTTTCCGG CGGGCAGCGC CAGCGCATTG CCATTGCCCG GGCGCTGGTG TTGAAGCCAG CACTGATTCT GCTGGATGAA CCCACGTCCG CACTGGACCG CACCGTACAG CGCCAGGTGG TGGAATTGCT GCGTAACCTG CAGCAAAAGT ACAACCTGAC CTACCTGTTC ATCAGCCATG ACCTGGCGGT GGTGAAGGCG TTGAGTCACC AGTTGATGGT GATCAAGCAT GGGCATGTGG TGGAGCAAGG GGACGCGCAG GCGATCTTCC ATGCGCCGCA GCATCCGTAT ACCCGACAGT TGCTGGAGGC GGCGTTTTTG GAGGTTGGGG GTTAG
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Protein sequence | MSEQNLIEVR DLAVEFVTGD QVNRVVDGVS FDIRKGETLA LVGESGSGKS VTAHSILRLL PYPLARHPSG SIRYEGKDLL QQSEKTLQRI RGNRIAMIFQ EPMTSLNPLH CIEKQINEIL LLHKGLTGKE ATARTLELLD MVGIPEPRKR LKALPHELSG GQRQRVMIAM ALANEPELLI ADEPTTALDV TVQLKILELL KELQARMGMA LLLISHDLNL VRRIAHRVCV MQRGQIVEQA ECATLFSSPQ HHYTQMLINA EPSGLPAHNP VGAPLLEVDD LKVWFPIKKG FLQRTVDHVK AVDGVNFSLP QGQTLGIVGE SGSGKSTLGL AILRLISSQG GIRFHGQNLE GLNQKAVRPL RREMQVVFQD PFGSLSPRMC VADIVGEGLR IHRIGTAQEQ EAAIIAALEE VGLDPRTRHR YPHEFSGGQR QRIAIARALV LKPALILLDE PTSALDRTVQ RQVVELLRNL QQKYNLTYLF ISHDLAVVKA LSHQLMVIKH GHVVEQGDAQ AIFHAPQHPY TRQLLEAAFL EVGG
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