Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4148 |
Symbol | |
ID | 1042320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4687023 |
End bp | 4688096 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637147548 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | NP_746266 |
Protein GI | 26990841 |
COG category | [R] General function prediction only |
COG ID | [COG4174] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0120356 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGCCT ACATCCTGCG CCGCCTGCTG CTGATCATCC CGACCCTGTT CGGCATCCTC ATCATCAACT TCATCATCGT CCAGGCCGCC CCCGGTGGCC CGGTCGAGCA AATGATCGCC AAGCTCGAAG GCTTCGAAGG CGCCACCAGC CGCATTGCCG GTGGCGGTGC CGAGGTTTCC GTGGCCGGCT CCAGCTACCG CGGCGCCCAG GGCCTGGACC CGGCGCTGAT CGCTGAAATC GAACGCATGT ACGGCTTCGA CAAGTCGCCG CCCGAGCGCC TGTGGATCAT GGTCAAGAAC TACGCCCAGC TGGACTTCGG CGACAGCTTC TTCCGCGACG CCAAGGTGAT CGACCTGATC GCCGAGAAGA TGCCGGTTTC GATCTCGCTG GGGCTATGGA GCACGCTGAT CATGTACCTG GTGTCGATCC CGCTGGGGAT CGCCAAGGCC GTGCGCCACG GCAGCCACTT CGACGTGTGG ACCAGCTCGG CAATCATCGT CGGCTACGCC ATCCCGGCGT TCCTGTTCGC CATCCTGCTG ATCGTGCTGT TCGCCGGTGG CAGCTACTTC GACTGGTTCC CGCTGCGTGG CCTCACCTCC AACAACTTCG ACGAACTGAG CACCACCGGC AAGGTGCTGG ACTACTTCTG GCACCTGGTG CTGCCGATCA CCGCGCTGGT CATCGGCAAC TTCGCCACCA TGACCCTGCT GACCAAGAAC AGCTTCCTCG ACGAAATCAA CAAACAGTAC GTGGTCACCG CCAAGGCCAA GGGCCTGAGC CGATCACGGG TGCTGTACGG CCACGTGTTC CGCAACGCCA TGCTGCTGGT GATCGCCGGC TTCCCCTCGG CGTTCATCGG CATCTTCTTC ACAGGCTCCT TGCTGATCGA GGTGATCTTC AGCCTCGACG GCCTGGGCCT GATGAGTTTC GAAGCGGCCA TCAACCGCGA CTACCCGGTG GTCTTCGGCA CCCTGTTCAT CTTCACCCTG CTAGGGCTGG TGGTGAAACT GATCGGCGAC CTGACCTACA CCTTGGTCGA TCCGCGCATC GACTTTGCCA GCCGGGAGCA CTGA
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Protein sequence | MLAYILRRLL LIIPTLFGIL IINFIIVQAA PGGPVEQMIA KLEGFEGATS RIAGGGAEVS VAGSSYRGAQ GLDPALIAEI ERMYGFDKSP PERLWIMVKN YAQLDFGDSF FRDAKVIDLI AEKMPVSISL GLWSTLIMYL VSIPLGIAKA VRHGSHFDVW TSSAIIVGYA IPAFLFAILL IVLFAGGSYF DWFPLRGLTS NNFDELSTTG KVLDYFWHLV LPITALVIGN FATMTLLTKN SFLDEINKQY VVTAKAKGLS RSRVLYGHVF RNAMLLVIAG FPSAFIGIFF TGSLLIEVIF SLDGLGLMSF EAAINRDYPV VFGTLFIFTL LGLVVKLIGD LTYTLVDPRI DFASREH
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