| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4147 |
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| Symbol | |
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| ID | 1042316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 4685186 |
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| End bp | 4687021 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637147547 |
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| Product | peptide ABC transporter, periplamic peptide-binding protein |
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| Protein accession | NP_746265 |
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| Protein GI | 26990840 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCAA CGCACCGTCT GCGCCGGCTG GCAGGCAGCC TGTTGCTCGC CTGCCTGAGC
CTTCCCGCGC TGGCCGCACC GCAGCACGCG CTCACCCTTT ACGATGAGCC ACCCAAGTAT
CCCGCCGACT TCAAGCACTT CGACTACGTC AACCCGGATG CGCCCAAGGG CGGCACCTTC
CGCCAGTCCA GCTTTGGCGG CTTCGACAGC CTCAACCCGT TCATCAACAA AGGCGTGGCG
GCCGAGAACA TCGGCATTAT CTACGACACC CTGATGCGCC AGAGCCAGGA TGAACCGTTC
ACCGAATACG GCCTGGTTGC CGGCAAGATC GAAAAGGCCC CGGATAACAG CTGGGTGCGC
TTCTACCTGC GCCCCGAAGC GCGCTTCCAT GACGGCCATC CGATGCGCGC CGACGACGTG
GTGTTCACCT TCAACGCCCT GATCAAGGAC GGCGCCCCAC TGTACCGCCA GTACTACGCC
GACGTTGCCG AAGTGGTCGC CGAAGAACCG CTGAAGGTGC TGTTCAAGTT CAAGCACAAG
AACAACCGCG AGCTGCCACT GATTCTCGGC CAGCTGCCGG TACTGCCCAA GCACTGGTAC
GAAAACCGCG AGTTCAACCG CGGCAATCTG GAAATCCCGT TGGGCAGCGG CCCGTACAAG
GTCGCCAAGG TCAAGGCCGG GCGCTCGGTG CGCTACGAAC GGGTCAAGGA CTACTGGGCC
AAGGACCTGC CCATCAACCG CGGCTTCTAC AACTTCGATG CCATGACGTT CGACGCCTAC
CGCGACACCA CCGTCGCCCT GGAGGCCCTC AAGGCCGGGG CATTCGACTA TGGCCTGGAA
GTCAGTGCCA AGAACTGGGC CACCGCTTAC AACGTGCCCG CCGTGCGCGA AGGTCGCCTG
ATCAAGGAAG AGCTGCCCAA CGGCAACCCC ACCGGTATGC AGGGCTTCAT TTTCAACATC
CGCCGCCCGG TTTTCCAGGA TGTGCGTGTG CGCCAGGCCC TGAGCCTGCT GCTGGACTAC
GAGTGGACCA ACAAGCAGCT GTTCAACGGC GCCTACACCC GTACCGGCAG CTACTTCGAG
AACTCGGAAA TGGCCGCCCG CGGCCTGCCC AGCCCCAACG AGCTGAAAAT CCTCGAACCA
CTGCGCGGCA AAGTGCCCGA GCAAGTATTT ACCGAGGTCT TCCACAACCC GGTCAGTGAC
GGCAGCGGCA TGATCCGCGA GCAACAGCGC CAGGCTTACA AGTTGTTGCA GGAAGCCGGC
TGGAAAATCG TCGACGACAA GATGGTCGAC GCCCAAGGCA AGCCGGCAAG CATCGAGTTC
CTGCTGGCGC AGACCGAGTT CGAACGCATT CTGCTGCCGT TCAAGCGCAA CCTTGCCGAC
CTCGGTATCG AGCTGAACAT TCGCCGCGTC GACGTTTCGC AGTACATAAC CCGCCTGCGC
TCGCGTGACT ACGACATGAT CGTTGGCGGC TACCCGCAAT CCAACTCGCC AGGCAACGAG
CAGCGCGAGT TCTGGTCCAG CGCCGCCGCC GACAACCCCG GTAGCCGCAA CTTCATCGGC
CTGCGCGACC CGGCCATCGA CCAACTGGTG GACCAGCTGA TCAACGCCGA CTCTCGGCAG
AGCCTGATCG ACCACTGCCG CGCCCTCGAC CGCGTGCTGC TGTGGGGCTA TTACGTGATC
CCCAACTGGC ACATCAAGAC CTGGCGTGTG GCCTACTGGA ACCACATCGG CCACCCGAAC
GTGTCGCCCA AGTACGACAT CGGCATCGAC ACCTGGTGGA TCAAGCCCGA TGTAACCCCG
GCGGTCAGCG AAGCGCCTGC GGACGAGGCC AACTAA
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| Protein sequence | MTPTHRLRRL AGSLLLACLS LPALAAPQHA LTLYDEPPKY PADFKHFDYV NPDAPKGGTF
RQSSFGGFDS LNPFINKGVA AENIGIIYDT LMRQSQDEPF TEYGLVAGKI EKAPDNSWVR
FYLRPEARFH DGHPMRADDV VFTFNALIKD GAPLYRQYYA DVAEVVAEEP LKVLFKFKHK
NNRELPLILG QLPVLPKHWY ENREFNRGNL EIPLGSGPYK VAKVKAGRSV RYERVKDYWA
KDLPINRGFY NFDAMTFDAY RDTTVALEAL KAGAFDYGLE VSAKNWATAY NVPAVREGRL
IKEELPNGNP TGMQGFIFNI RRPVFQDVRV RQALSLLLDY EWTNKQLFNG AYTRTGSYFE
NSEMAARGLP SPNELKILEP LRGKVPEQVF TEVFHNPVSD GSGMIREQQR QAYKLLQEAG
WKIVDDKMVD AQGKPASIEF LLAQTEFERI LLPFKRNLAD LGIELNIRRV DVSQYITRLR
SRDYDMIVGG YPQSNSPGNE QREFWSSAAA DNPGSRNFIG LRDPAIDQLV DQLINADSRQ
SLIDHCRALD RVLLWGYYVI PNWHIKTWRV AYWNHIGHPN VSPKYDIGID TWWIKPDVTP
AVSEAPADEA N
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