| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4146 |
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| Symbol | |
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| ID | 1042310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 4683360 |
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| End bp | 4685189 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637147546 |
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| Product | peptide ABC transporter, periplamic peptide-binding protein |
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| Protein accession | NP_746264 |
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| Protein GI | 26990839 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATACGTC CCCTCCTGCT GTCACTCAGC CTGGCCTTGA GCTTTCCCGC AGCCGCGATC
GTGAGCGAAA GCCACGGATA CGCGCAGTTC GGCACGCTCA AGTACCCAGC CACCTTCACC
CACTTCGACT GGGTCAACCC GCAAGCGCCC AAGGGCGGCA CGTTGCGGGC CATGGCTTTT
GGTACCTTCG ACACGCTCAA CCCCTACACC TTCAAAGGGT CGAGCCCGAT TACCACGCCC
AATTTCCAGC AGTACGGCAT CAGCGAGCTG AACGAGCCAC TGATGGTCGG CACGGGCCAG
TACGACCCGT CCGGTGACGA GCCAACCTCC AGCTATGGCC TGATCGCCCG CTCGGTGGAG
TACAGCGAGG ACCGCAGCTG GGTGGTGTTC AACCTGCGCC CCGAAGCCCG CTGGCATGAC
GGCCAGCCCA TCACCTCGGC TGACGTGGCC TTCTCGTACC GCACGCTGCT CAAGGATGGC
CACCCGATCT ACCGCACCAA CCTGCAGGAA GTGCAGCGGG TAGACATCCT CGGCCCGCTA
CGCATCCGCT TCGTGTTCAA ACGCGCCGGC AACCCGCTGC TGATCCTGCG CCTGGGCGAA
ATGCCGGTAC TGCCCAAACA CTACTGGCAG AAGCGCGACT TCAAGGCCAC CACCTTCGAG
CCCCCCTTGG GCAGCGGCCC CTACCGCATC ACCCAGGTAC AACCCGGACG ACGCCTGGTG
TTCGAACGGG TGAAGAACTA CTGGGGCAAA GACCTGGCGG TCAACCGTGG CAAGTACAAT
TTCAATCGGG TCGAATACGA GTTCTATCGT GACGCGACGG TGGCCTTCGA AGCCTTCAAG
GCCGGAGAGT TCGACATCTA TATCGAGCAC CAGGCAAAAA ACTGGGCCAA CGGTTACAAC
TTCCCTGCCG TGCGCCGGGG TGAAGTGATC AAGGCACAAA TCCCGCACAG CATCCCCACG
CAAACACAGG GCCTGTTCAT GAACAGCCGC CGGGCCGCGT TCAGTGACCC GCGGGTACGC
CAGGCGCTGG GGCTGATGCT GGACTTCGAG TGGACCAACC GCGCGCTGTT CAGCAGCGCC
TACCGCCGCT CGACCAGCTA CTACCCAAAC AGCGAGTTCG CCGCCAGCGG CCTGCCCACC
GGCAAGGAGT GGCTGCTGCT GGCGCCATTC CGTGACCAGT TGCCCGCCAA GCTGTTCAGC
GAACCGTACA AGGTCAGCCA CACCGATGGC AGGGGTATCA GCCGCCAGAC CCTGCGCCAG
GCTCTGGGCC TGCTCGCCGA GGCCGGCTGG AAGCTGCACG GCCAGCGCCT GGTCGACAGC
AAGGGCCAGC AATTGCGCAT GGAACTGCTG CTGGTAAACC CCAACCTTGA ACGCATCCTG
CAACCTTATG TCGAAAACCT GTCCAGCATC GGCATCGATG CGCGCTTGCG CACCGTGGAC
CGTGCCCAGT ACAAACAACG TCTGGACCAG TTCGATTTCG ACATGATTCT GATGACCCTG
AACCAGACCC TCAGCCCCGG CCTCGAACAA TGGCTGTACT TCCATTCCAG CCAGGCCGCG
ACAAAGGGCA GCAAGAACTA TGCTGGGGTC AAGGACCCGG TGGTCGACCA CCTGCTCGAC
ACCCTGCTCG CCGCCCGCAC CCGCGATGAC CAGGTCGCCG CTGCCCGCGC CCTGGACCGC
GTGCTCTCAT GGCACTACTA CATGATCCCC AACTGGTACC TCGACAACCA TCGCCTGGCC
TACCGCAACC GGTTCGCCTT CGTCACCACG CCGCCCTACA CCCTTGGGCT GAATAGCTGG
TGGATCAAGA CTTCGGAGAA AGCCCAATGA
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| Protein sequence | MIRPLLLSLS LALSFPAAAI VSESHGYAQF GTLKYPATFT HFDWVNPQAP KGGTLRAMAF
GTFDTLNPYT FKGSSPITTP NFQQYGISEL NEPLMVGTGQ YDPSGDEPTS SYGLIARSVE
YSEDRSWVVF NLRPEARWHD GQPITSADVA FSYRTLLKDG HPIYRTNLQE VQRVDILGPL
RIRFVFKRAG NPLLILRLGE MPVLPKHYWQ KRDFKATTFE PPLGSGPYRI TQVQPGRRLV
FERVKNYWGK DLAVNRGKYN FNRVEYEFYR DATVAFEAFK AGEFDIYIEH QAKNWANGYN
FPAVRRGEVI KAQIPHSIPT QTQGLFMNSR RAAFSDPRVR QALGLMLDFE WTNRALFSSA
YRRSTSYYPN SEFAASGLPT GKEWLLLAPF RDQLPAKLFS EPYKVSHTDG RGISRQTLRQ
ALGLLAEAGW KLHGQRLVDS KGQQLRMELL LVNPNLERIL QPYVENLSSI GIDARLRTVD
RAQYKQRLDQ FDFDMILMTL NQTLSPGLEQ WLYFHSSQAA TKGSKNYAGV KDPVVDHLLD
TLLAARTRDD QVAAARALDR VLSWHYYMIP NWYLDNHRLA YRNRFAFVTT PPYTLGLNSW
WIKTSEKAQ
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