Gene PP_4127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4127 
SymbolnuoJ 
ID1042270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4665423 
End bp4665923 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content64% 
IMG OID637147528 
ProductNADH dehydrogenase subunit J 
Protein accessionNP_746246 
Protein GI26990821 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTCG CTTTCTACTT CGCATCCGGG ATCGCCGTGG TCTCCACCCT TCGGGTGGTA 
ACTGGCACCA ACCCCGTGCA CGCCTTGCTT TACCTGATCA TTTCGCTGAT TTCCGTGGCC
ATGATCTTCT TCGCCCTGGG TGCGCCGTTT GCCGGCGCCC TGGAAGTGAT CGCCTACGCC
GGCGCCATCA TGGTGCTGTT CGTGTTCGTG GTGATGATGC TCAACCTCGG GCCGGCTTCG
GTCGCCCAGG AACGGGGCTG GCTCAAGCCC GGTATCTGGG CAGGGCCAGT GATCCTCGGC
ACCCTGCTGC TGGCGGAGCT GCTGTACGTC CTGTTCGTCG CCCCGAGCGG CGCCGGCATC
AGCGGTACCA CCGTGGGCCC GAAAGCCGTG GGCATCAGCC TGTTCGGCCC GTACCTGCTG
GTGGTCGAAC TGGCGTCGAT GCTGCTGCTG GCTGCAGCCG TCACCGCCTT CCACCTGGGC
CGCAACGAGG CGAAGGAGTA A
 
Protein sequence
MEFAFYFASG IAVVSTLRVV TGTNPVHALL YLIISLISVA MIFFALGAPF AGALEVIAYA 
GAIMVLFVFV VMMLNLGPAS VAQERGWLKP GIWAGPVILG TLLLAELLYV LFVAPSGAGI
SGTTVGPKAV GISLFGPYLL VVELASMLLL AAAVTAFHLG RNEAKE