Gene PP_4118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4118 
Symbol 
ID1042264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4655103 
End bp4655798 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content64% 
IMG OID637147519 
ProductYhhN family protein 
Protein accessionNP_746237 
Protein GI26990812 
COG category[S] Function unknown 
COG ID[COG3714] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.932957 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.74951 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGTGG CAGCCCAGCA GCAAGGACCG CCCATGCCTC GTCCAAGCCA CCTGATGATT 
CTCGCCCTGA CCGCCGCTGC CCTCTATATA TATGCACTGG CCAGCGACAA CACCATGCTC
GCCCTGATGG CCAAACCCAT CCCGGTGCTG GCCTTGATTG CCTGGCTGCG CAGCACCCCG
GTTTCGCCTT ATCGCACGTG GATCTCGATC GGCCTGGGCT TCTCGGTACT CGGTGACATC
CTGCTGGCCA TCCCCGCCGA CCTGTTCGTG TTCGGCCTGG CCGCCTTCCT TTGCGCCCAC
CTTGCTTACC TGCGCGGCTA TTGCGGCATT ACCCTGCGCC CCGCCCTGCC CGCACTGATC
TTCAGCGCAA TCACTGGCAT CGCGCTGCTC GGCGTACTGG CCAGCAACGG CCTCGGCCCG
TTGCTGATCC CGGTAGCACT CTACGCCCTG GCCATCAGCG CCATGCTCTG GCGCGCACTG
GCCTGCGGGG GAGTGGCAGC ACTGGGTGCC GGCCTGTTCG TGTTCTCCGA CAGCCTGATC
GGCATCGACC GCTTCATCAG CCCGTTCGCC GCCGCACCGT ACCTGATCAT CCTCGCCTAC
TGGCTCGGCC AATGGGCCAT CGCTTCATCA GTCGGTCATC GCTCAACCGA TAAAGTATTG
ACCCAGAGCG GTGCGCGCAG GACCGAGAGC TGCTAG
 
Protein sequence
MLVAAQQQGP PMPRPSHLMI LALTAAALYI YALASDNTML ALMAKPIPVL ALIAWLRSTP 
VSPYRTWISI GLGFSVLGDI LLAIPADLFV FGLAAFLCAH LAYLRGYCGI TLRPALPALI
FSAITGIALL GVLASNGLGP LLIPVALYAL AISAMLWRAL ACGGVAALGA GLFVFSDSLI
GIDRFISPFA AAPYLIILAY WLGQWAIASS VGHRSTDKVL TQSGARRTES C