Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4118 |
Symbol | |
ID | 1042264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4655103 |
End bp | 4655798 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637147519 |
Product | YhhN family protein |
Protein accession | NP_746237 |
Protein GI | 26990812 |
COG category | [S] Function unknown |
COG ID | [COG3714] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.932957 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.74951 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGTGG CAGCCCAGCA GCAAGGACCG CCCATGCCTC GTCCAAGCCA CCTGATGATT CTCGCCCTGA CCGCCGCTGC CCTCTATATA TATGCACTGG CCAGCGACAA CACCATGCTC GCCCTGATGG CCAAACCCAT CCCGGTGCTG GCCTTGATTG CCTGGCTGCG CAGCACCCCG GTTTCGCCTT ATCGCACGTG GATCTCGATC GGCCTGGGCT TCTCGGTACT CGGTGACATC CTGCTGGCCA TCCCCGCCGA CCTGTTCGTG TTCGGCCTGG CCGCCTTCCT TTGCGCCCAC CTTGCTTACC TGCGCGGCTA TTGCGGCATT ACCCTGCGCC CCGCCCTGCC CGCACTGATC TTCAGCGCAA TCACTGGCAT CGCGCTGCTC GGCGTACTGG CCAGCAACGG CCTCGGCCCG TTGCTGATCC CGGTAGCACT CTACGCCCTG GCCATCAGCG CCATGCTCTG GCGCGCACTG GCCTGCGGGG GAGTGGCAGC ACTGGGTGCC GGCCTGTTCG TGTTCTCCGA CAGCCTGATC GGCATCGACC GCTTCATCAG CCCGTTCGCC GCCGCACCGT ACCTGATCAT CCTCGCCTAC TGGCTCGGCC AATGGGCCAT CGCTTCATCA GTCGGTCATC GCTCAACCGA TAAAGTATTG ACCCAGAGCG GTGCGCGCAG GACCGAGAGC TGCTAG
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Protein sequence | MLVAAQQQGP PMPRPSHLMI LALTAAALYI YALASDNTML ALMAKPIPVL ALIAWLRSTP VSPYRTWISI GLGFSVLGDI LLAIPADLFV FGLAAFLCAH LAYLRGYCGI TLRPALPALI FSAITGIALL GVLASNGLGP LLIPVALYAL AISAMLWRAL ACGGVAALGA GLFVFSDSLI GIDRFISPFA AAPYLIILAY WLGQWAIASS VGHRSTDKVL TQSGARRTES C
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