| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4098 |
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| Symbol | uvrC |
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| ID | 1042204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 4633283 |
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| End bp | 4635106 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637147500 |
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| Product | excinuclease ABC subunit C |
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| Protein accession | NP_746218 |
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| Protein GI | 26990793 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.125966 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0386444 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAAG TCTTTGATGC CAGCGCATTC CTGGCGACCT GCAGCGGTCG CCCGGGCGTT
TACCGGATGT TCGACGGCGA AGCCCGGCTG CTTTACGTGG GCAAGGCCAA GAACCTGAAG
AAGCGCCTGG CCAGCTATTT CCGCAAGACC GGCCTTGCGC CCAAGACCGC CGCGCTGGTT
GCGCGCATCG CCCAGGTTGA AACCACCATC ACCGCCAACG AAACTGAGGC GTTGCTGCTG
GAGCAGAACC TGATCAAGGA GTGGCGGCCG CCTTACAACA TCCTGCTGCG CGACGATAAG
TCCTACCCCT ACGTGTTTCT GTCCGATGGC GAGTTCCCGC GCCTGGGCAT TCACCGTGGG
GCGAAAAAGG CCAAGGGCCG TTACTTTGGC CCGTACCCCA GCGCCGGGGC CATTCGCGAA
AGCCTCAGCC TGCTGCAAAA GGCTTTTTCT GTGCGTCAGT GCGAAGACAG CTACTACGCC
AACCGCACCC GGCCATGCCT GCAGTACCAG ATAAAACGCT GCAAAGGGCC CTGCACCGAC
CTGGTGACTG CCGAGGAATA CGCAGAGGAC GTTCGTCATT CGGTGATGTT TCTGGAAGGG
CGTAGCCAGC AACTGGGCAA TGAGTTGAAC GCCGAGATGG AAAAGGCCGC CATGGCCCTC
GATTTCGAAA AAGCCGCCGA GCTGCGCGAC CAGATCGCCT TGTTGCGCCG CGTGCAGGAC
CAACAGTACA TCGAGGGCGG CAGCGGCGAT GTCGACGTCA TCGCCGCCTT CGTCAACCCG
GGTGGTGCCT GTGTGCACCT GATCAGCGTG CGCGGCGGGC GAGTACTGGG CAGCAAGAAC
TTCTTCCCGC AGGTGGGCAT CGAGGAGGAG GTGGCCGAGG TCATGGCCGC ATTCCTGTCC
CAGTACTATC TGGGCAACGC AGAGCGCGAG CTACCCGGCG AGTTGATCGT CAATGTTGTT
CACGAAGATT TCAACGCCAT CACCGAAGCG CTGCACACGC TGCGTGGCCG CGAACTGACC
ATCAGCCACC GGGTGCGTGG CACTCGCGCC CGCTGGCAGC AACTGGCCGT GACCAATGCC
GAGCAGGCGT TGAATGCCCG CCTGGCCAAC CGCCAGCACA TGGCTGCGCG CTTCGAAGCC
CTGGCCGAAG TGCTGGGCCT GGATGAAGTG CCGCAACGCC TGGAATGCTA CGACATCAGC
CACTCCAGTG GTGAAGCTAC CGTGGCCAGT TGCGTGGTGT TCGGCCCCGA AGGGCCGATC
AAGTCCGACT ACCGCCGCTT CAACATCGAA GACGTCACCG CAGGTGACGA TTATGCGGCC
ATGCATCAGG CCCTGACCCG CCGCTATGGG CGCATCAAGG ACGGCGAGGG CAAGCTGCCC
GATGTGCTGC TGGTGGACGG CGGCAAGGGC CAGCTGAACA TGGCCCGCGA TGTGATGCAG
GAGCTGGGCT TCACCGACCT CACCCTGTTG GGTGTGGCCA AGGGCGTCAC ACGCAAGGCG
GGTTTCGAAA CCCTGTACCT GAACGATGTG CATCACGAAT TCACCCTCAA GGGCGATTCA
TCGGCGTTGC ACCTGATCCA GCAGATCCGC GACGAAGCCC ACCGCTTCGC TATCACCGGC
CACCGGGCCC GTCGTGGCAA GGCTCGTCGA GTCTCCAGCC TTGAAGATGT GGCCGGGGTA
GGGCCCAAGC GCCGCCGCGA CCTGCTTAAA CATTTCGGCG GCCTGCAGGA GCTCAACCGC
GCCAGTATCG ATGAAATCGC CAAAGCCCCC GGCATCAGTA AAAAGCTTGC CGAGTCGATT
TATGCCAGCC TGCATAGCGA GTAG
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| Protein sequence | MSQVFDASAF LATCSGRPGV YRMFDGEARL LYVGKAKNLK KRLASYFRKT GLAPKTAALV
ARIAQVETTI TANETEALLL EQNLIKEWRP PYNILLRDDK SYPYVFLSDG EFPRLGIHRG
AKKAKGRYFG PYPSAGAIRE SLSLLQKAFS VRQCEDSYYA NRTRPCLQYQ IKRCKGPCTD
LVTAEEYAED VRHSVMFLEG RSQQLGNELN AEMEKAAMAL DFEKAAELRD QIALLRRVQD
QQYIEGGSGD VDVIAAFVNP GGACVHLISV RGGRVLGSKN FFPQVGIEEE VAEVMAAFLS
QYYLGNAERE LPGELIVNVV HEDFNAITEA LHTLRGRELT ISHRVRGTRA RWQQLAVTNA
EQALNARLAN RQHMAARFEA LAEVLGLDEV PQRLECYDIS HSSGEATVAS CVVFGPEGPI
KSDYRRFNIE DVTAGDDYAA MHQALTRRYG RIKDGEGKLP DVLLVDGGKG QLNMARDVMQ
ELGFTDLTLL GVAKGVTRKA GFETLYLNDV HHEFTLKGDS SALHLIQQIR DEAHRFAITG
HRARRGKARR VSSLEDVAGV GPKRRRDLLK HFGGLQELNR ASIDEIAKAP GISKKLAESI
YASLHSE
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