| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4058 |
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| Symbol | glgB |
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| ID | 1044393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 4577897 |
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| End bp | 4580107 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637147465 |
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| Product | glycogen branching enzyme |
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| Protein accession | NP_746184 |
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| Protein GI | 26990759 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTTA CAACGCGTGA AAACGGTGGC CTTCGGCAAC GGGACCTCGA CGCCCTGGCC
CGCGCCGAAC ACGCCGATCC TTTTGCGGTA CTCGGCCCCC ACGGCGACGG CGCAGGCGGG
CAGGTGGTCC GCGCCTTTCT GCCCAATGCC CTGAAAGTGC GCATTCAGGC CCGGGATGAC
GGGCGGGTGC TTGCCGAAAT GGAGCAGGGC AGCCTGCCCG GGTTGTTCAG CGCGCACCTC
GATAAGGCAC AGCCCTATCA GCTTCACATC GTCTGGGCCG GTGGCGAGCA AGTTACCGAA
GACCCCTACA GCTTCGGCCC GCAATTGGGA GACATGGACC TTCACTTGTT CGCGGAAGGC
AATCACCGCG ATTTGTCCGG GCGCTTCGGT GCCCAGCCGA CTCAGGTCGA TGGCATCGAC
GGCGTGTGTT TCTCGGTCTG GGCGCCGAAT GCCCGGCGAG TGTCGGTGGT GGGTGATTTC
AACAACTGGG ATGGTCGCCG TCACCCCATG CGCCTGCGCC ACGGTGCGGG GGTGTGGGAG
CTGTTCATTC CGCGTCTGGG CGTGGGCGAA ACCTACAAGT TCGAAGTACT CGGCAAGGAC
GGCATACTGC CGCTGAAGGC CGACCCGCTG GCCCGTGCCA CCGAGCTGCC GCCGAGCACG
GCATCCAAGG TAGCCGGTGA ACTCAGCCAC GCCTGGCAGG ACCATGACTG GATGGCGCAA
CGCGCCCAGC GCCATGCCTA CAACGCGCCG TTGTCGATCT ACGAGCTGCA CCCAGGATCA
TGGCGCTGCG AGCTGGACGA AGCGGGGGAA ATCGGGCGTT TCTACAATTG GCGGGAACTG
GCCGAGCGGC TGGTGCCCTA TGTGCAGGAG CTGGGCTTTA CCCACATCGA ACTGCTGCCG
ATCATGGAGC ACCCGTTCGG CGGCTCCTGG GGCTATCAAC CACTGTCGAT GTTCGCACCC
ACCTCGCGCT ACGGCAGTGC CGAAGATTTC GCCGCGTTCA TCGACGCCTG CCACCAAGGG
GGTATCGGTG TGCTGCTGGA CTGGGTGCCG GCGCATTTCC CCACTGACGA ACACGGCCTG
GCGCGCTTCG ACGGCACGGC CCTGTACGAA TACGACAACC CACTGGAAGG CTACCACCAG
GACTGGAACA CGCTGATCTA CAACCTCGGC CGCAATGAAG TGCGCGGCTT CATGATGGCC
TCGGCGCTGC ACTGGTTGAA GCATTTCCAC ATCGACGGCC TGCGCGTCGA TGCGGTGGCC
TCGATGCTGT ACCGCGACTA CTCGCGCAAG GCCGGCGAAT GGGTACCCAA CCGCCACGGC
GGGCGTGAGA ACCTGGAGGC CATCGACTTC ATCCGCCACC TCAACGGCGT GGCTGCCCAC
GAGGCCCCGG GTGCGCTGAT CATCGCCGAG GAGTCCACCG CCTGGCCTGG GGTCAGCCAA
CCTACCCAAC AGGGCGGCCT GGGTTTTGCC TACAAGTGGA ACATGGGCTG GATGCACGAC
ACCCTGCACT ACATCCAGAA CGACCCGGTG CACCGCACCT ACCACCACAA CGAGATGAGC
TTCGGGCTGA TCTATGCCTA TTCCGAGCAC TTCATCCTGC CCATTTCCCA TGATGAGGTG
GTGCACGGCA AGCATTCGCT GATCGACAAG ATGCCCGGCG ACCGCTGGCA GAAGTTCGCC
AACCTGCGTG CCTACCTCAC CTTCATGTGG GCACACCCGG GCAAGAAGCT GCTGTTCATG
GGCTGCGAGT TCGGCCAGTG GCGTGAGTGG AACCACGACG CCGAACTGGA CTGGTACCTG
CTGCAGTATC CCGAGCACCA GGGCGTGCAG CGCCTGGTGG GCGACCTCAA CCGCCTGTAC
CGCGAAGAGC CGGCGTTGCA CGAGCAGGAT TGCCAGCCGC AGGGTTTCCA GTGGTTGATC
GGTGACGACG CGCAGAACAG CGTGTACGCC TGGCTGCGCT GGAGCAGCAG CGGCGAGCCG
GTGCTGGTGG TGGCCAACTT CACCCCGGTA CCCCGTGAGG GTTACCGCAT TGGCGTGCCG
TTCGGCGAGC GTTGGCAGGA GCTTCTGAAC AGTGATGCCG AGCTGTATGC CGGGTCGAAT
GTCGGCAATC TCGGGGCGGT GGCCAGTGAC GAAGTGGCCA GCCACGGGCA GCCATTATCG
CTGGCCCTGA ACCTGCCGCC GTTGGGGGTG TTGATCATGA AGCCCGCCTG A
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| Protein sequence | MNVTTRENGG LRQRDLDALA RAEHADPFAV LGPHGDGAGG QVVRAFLPNA LKVRIQARDD
GRVLAEMEQG SLPGLFSAHL DKAQPYQLHI VWAGGEQVTE DPYSFGPQLG DMDLHLFAEG
NHRDLSGRFG AQPTQVDGID GVCFSVWAPN ARRVSVVGDF NNWDGRRHPM RLRHGAGVWE
LFIPRLGVGE TYKFEVLGKD GILPLKADPL ARATELPPST ASKVAGELSH AWQDHDWMAQ
RAQRHAYNAP LSIYELHPGS WRCELDEAGE IGRFYNWREL AERLVPYVQE LGFTHIELLP
IMEHPFGGSW GYQPLSMFAP TSRYGSAEDF AAFIDACHQG GIGVLLDWVP AHFPTDEHGL
ARFDGTALYE YDNPLEGYHQ DWNTLIYNLG RNEVRGFMMA SALHWLKHFH IDGLRVDAVA
SMLYRDYSRK AGEWVPNRHG GRENLEAIDF IRHLNGVAAH EAPGALIIAE ESTAWPGVSQ
PTQQGGLGFA YKWNMGWMHD TLHYIQNDPV HRTYHHNEMS FGLIYAYSEH FILPISHDEV
VHGKHSLIDK MPGDRWQKFA NLRAYLTFMW AHPGKKLLFM GCEFGQWREW NHDAELDWYL
LQYPEHQGVQ RLVGDLNRLY REEPALHEQD CQPQGFQWLI GDDAQNSVYA WLRWSSSGEP
VLVVANFTPV PREGYRIGVP FGERWQELLN SDAELYAGSN VGNLGAVASD EVASHGQPLS
LALNLPPLGV LIMKPA
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