| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4057 |
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| Symbol | |
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| ID | 1042122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 4576619 |
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| End bp | 4577788 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637147464 |
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| Product | outer membrane autotransporter |
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| Protein accession | NP_746183 |
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| Protein GI | 26990758 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.679978 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGGTTT GGGTCGCCCA CTGTTTTTGC CGTACAGCTC GTGACAACAG GCCAGGTTCT
CGGGCTGCAC CACAAAAACA AAGGAGATCC GCCATGAAAA GCACCTCGAA CCCCTTGCGC
TTCGACAGCA TTTTCTACGC GGTTTCCACG TCGCTGCTTC TGGCAACCCC GGTGGAAACG
ATCGCGTACG AACTGCAGGG TGACCCCACC TCCCCCGGCT TTCTGCAGCA ACCCGTGGCG
GCGCAACTGT CGCTCGACCC GCTCAGTGCC AGTGGGTTGA GTCTCGGCAC CCTCAATGCG
TTTTCGCAGC AGATGAGCGA ACGCCACCAG CAGCCGGCAC CGGACCTGAT TGCCAGTCAG
TGGGCGCAGT TCTTCCCCAC CAGTGCGCGT GGCCGCGCGC TGCCCCCGGC ACAGCTGGAG
GCGCCCAGCC AGCAACTGAT GATCGGCCCG GACCTGTTCG TGCGTGAAAC TGCAGCGGGC
GATGTGCACC GCGCAGGGAT TTTCGTGGGG CACAACAACC TGCAAAGCAG CTTCAGAGGC
GCGCGCCCTC TGCTGGGCGA CAAGCAGCGC AAAGCGGTGA ACTTGAGCGG GGAAAGCCTG
GGGGTGTACT GGAGCATGAC CCATGAACAG GGTTGGCACC TGGATGCCGT AGCCATGGGC
TCGCGGATCG ACGTGATGGG CCGTGGCGAA AACGGCCAGC GCCTGGACGA CAGTGGCCAC
GCAATGACCT TCTCGGTAGA GGGCGGTTAC CCGATCCGCC TGGGGGGCAA CTGGGTCATC
GAGCCCCAGG CACAGTTGAT CAACCAGCAA TTCTTCCCTG GCAACCAGGT GCAGGAAGAG
ACCTTGCAAG CCTTCGACAG CCAGCCGAGC TGGAGCGGCC GGGTCGGTGC CAAGTTGTCC
GGGCGCTACG AAGTGCGCGG CATGCCCATC GAACCCTATG TGCGTACCAA CGTGTGGTAT
GACTTCAGCA ATGCCGATGA GGTGAAGCTG GACCAGGTCG ACAAGATCTC CAGCTCGCGC
TATTCGACCA CAGTGGAGTT GGGATTGGGG CTGGTGGCGC GGGTGACGCC TTCGGTGGCG
TTGTTCGTCA GCGCCGATTA CAGCAGTGAT GTGGATGACA ATGACCTGAA CGGGTTGATT
GGCAGCCTTG GGGTGCGGAT GCGGTGGTAG
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| Protein sequence | MLVWVAHCFC RTARDNRPGS RAAPQKQRRS AMKSTSNPLR FDSIFYAVST SLLLATPVET
IAYELQGDPT SPGFLQQPVA AQLSLDPLSA SGLSLGTLNA FSQQMSERHQ QPAPDLIASQ
WAQFFPTSAR GRALPPAQLE APSQQLMIGP DLFVRETAAG DVHRAGIFVG HNNLQSSFRG
ARPLLGDKQR KAVNLSGESL GVYWSMTHEQ GWHLDAVAMG SRIDVMGRGE NGQRLDDSGH
AMTFSVEGGY PIRLGGNWVI EPQAQLINQQ FFPGNQVQEE TLQAFDSQPS WSGRVGAKLS
GRYEVRGMPI EPYVRTNVWY DFSNADEVKL DQVDKISSSR YSTTVELGLG LVARVTPSVA
LFVSADYSSD VDDNDLNGLI GSLGVRMRW
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