| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4056 |
|---|
| Symbol | |
|---|
| ID | 1042134 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 4575601 |
|---|
| End bp | 4576395 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637147463 |
|---|
| Product | endonuclease/exonuclease/phosphatase |
|---|
| Protein accession | NP_746182 |
|---|
| Protein GI | 26990757 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3568] Metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCTCG AAGCCGGCAG TAATGGTTTC GCCAGCGTCA GCCAGGCCCC GGCCGTGAAA
CGCCTGCGGG TACTGACGGT GAATACCCAC AAGGGCTTCA CCGCCTTCAA CCGGCGCTTT
ATCTTGCCGG AGCTGCGCGA GGCGGTGCGC AGTACACAGG CCGACATTGT CTTCCTTCAG
GAAGTGCTCG GCAGCCACGA TCGCCACGCC GCGCGCTACC CCGGCTGGCC GCAGACCTCG
CAGTACGAAT TCCTCGCCGA CAGCATGTGG AGCGACTTTG CCTATGGCCG CAACGCGGTC
TACCCTGACG GCCACCACGG CAATGCGTTG CTGTCCAAAT ACCCGATCAT CGAGCACCGC
AACCTGGACG TGTCGATCAC CGGCCCCGAA CGCCGCGGCC TGTTGCACTG TGTGCTGGAG
GTGCCGGGGC AAGGCCAGGT GCATGCGGTC TGCGTGCACC TGTCGTTGCT GGAAAGCCAC
CGGCAAAAGC AGCTGCAGTT GCTGCGTAAA CTGCTGGACG CCCTGCCGGC CAACGCCCCG
GTGATCATCG CCGGCGACTT CAACGACTGG AAAAGCCATG GCAACCGCAC CCTTGGCCTG
CAACGCGACT TGCACGAAGC CTTCGAGCGC CACCACGGCC ACCTCGCGCG CACCTACCCG
GCCCGCCTGC CGCTGCTACG CCTGGACCGC ATATACCTGC GTAACGCCGA AAGCCATGGG
CCGCGGATTC TGGGGCACAA ACCTTGGTCG CACCTGTCAG ATCACCTGCC GCTGGCCGTT
GAAGTGCGAC TTTAG
|
|---|
| Protein sequence | MSLEAGSNGF ASVSQAPAVK RLRVLTVNTH KGFTAFNRRF ILPELREAVR STQADIVFLQ
EVLGSHDRHA ARYPGWPQTS QYEFLADSMW SDFAYGRNAV YPDGHHGNAL LSKYPIIEHR
NLDVSITGPE RRGLLHCVLE VPGQGQVHAV CVHLSLLESH RQKQLQLLRK LLDALPANAP
VIIAGDFNDW KSHGNRTLGL QRDLHEAFER HHGHLARTYP ARLPLLRLDR IYLRNAESHG
PRILGHKPWS HLSDHLPLAV EVRL
|
|---|
| |