| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4055 |
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| Symbol | glgX |
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| ID | 1042124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 4573326 |
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| End bp | 4575479 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637147462 |
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| Product | glycogen debranching protein GlgX |
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| Protein accession | NP_746181 |
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| Protein GI | 26990756 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.119341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCCCC GCACCCCAAA GAAAACCCGC TCGGTCGCAC CATCGCGCAT TCGCGAAGGC
ATGCCCTTCC CCCTCGGCGC CACCTGGGAT GGCCTTGGGG TCAACTTCGC TCTCTTCTCG
GCCAACGCCA CCAAGGTCGA GCTGTGCCTG TTCGACTCCA CCGGCGAGCA GGAACTCGAG
CGCATAGAGC TGCCCGAATA CACCGATGAG ATCTACCATG GCTACCTCCC GGACGCTCAC
CCCGGCCTGG TCTATGGCTA CCGGGTGTAT GGCCCCTACG AGCCGGAAAA CGGCCACCGC
TTCAACCCCA ACAAACTGCT GATCGACCCG TATGCCAAGC AACTGGTCGG CAGCCTGAAA
TGGTCCGAGG CACTGTTCGG CTACACCATC GGCCACCCCG ATGGTGACCT GTCGTTCGAC
GAGCGCGACA GCGCGCCTTT CGTGCCCAAA TGCAAGGTTA TCGACCCGGC GTTCACCTGG
GGCCGCGACC AGCGCGTGCA GATCCCATGG GAGCGCACGA TCATCTATGA AGCGCATGCC
CGCGGCATCA GCATGCGCCA CCCGGCTGTG CCTGAAGAAC TGCGCGGCAC CTTCGCCGGC
CTGGCCAACG ACGAGTTGCT CAAACACATC AAGGACCTTG GTGTGTCGAG CATCGAGCTG
TTGCCGATTC ACGCCTTCGT CAACGACCAG CACCTGCTGG ACAAGGGCCT GAACAACTAC
TGGGGCTACA ACAGCATCGC CTTTTTCGCC CCGCACCCGC GCTACCTGGC CAGCGGCAAG
ATCGCCGAGT TCAAGGAGAT GGTCGCGCAC CTGCACGACG CGGGGCTTGA GGTGATCCTG
GACGTGGTCT ACAACCACAC CGCCGAAGGC AACGAGCGCG GCCCGACCCT GTCGATGCGC
GGCATCGACA ACGCCTCGTA CTACCGCCTG ATGCCGGACG ACAAGCGCTA CTACATCAAC
GACTCCGGCA CCGGCAACAC CCTGGACCTG AGCCACCCCT GCGTGCTGCA GTTGGTCACC
GACTCGCTTC GCTACTGGGC CGGCGAAATG CACGTGGACG GTTTTCGCTT CGACCTGGCG
ACCATCCTTG GCCGTTACCA CGATGGCTAC AGCGAGCGTC ATGGCTTCCT GGTCGCCTGC
CGCCAGGACC CGATGCTGAG CCAGGTCAAG CTGATTGCCG AACCGTGGGA TTGCGGCCCC
GGCGGCTACC AGGTGGGCAA CTTCGCCCCG GGCTGGGCGG AATGGAACGA CCGCTTCCGC
GATACCGCAC GCGCCTTCTG GAAAGGCGAC GAAGGCCAGC TGGCCGATTT TGCCGCGCGC
TTGACCGCCT CGGGCGACAT GTTCAACAAC CGCGGGCGCC GGCCCTATTC CTCGGTCAAC
TTCATCACCG CCCACGACGG TTTCACCCTG CGCGACCTGG TGTCCTACAA CCACAAGCAC
AACGAAGACA ACGACGAAAA CAACCAGGAC GGCACCGACA ACAACCTGTC GTGGAACTGC
GGCGTCGAAG GGCCGACCGA CGACCCGGCG ATCAATGCCC TGCGCATGCG CCAGATGCGC
AACTACTTCG CCACCTTGCT GCTGGCCCAG GGCACGCCAA TGATCGTTGC CGGCGACGAG
TTCAGCCGCA CCCAGCACGG CAACAACAAC GCTTACTGCC AGGACAGCGA GATCGGCTGG
GTGAACTGGG ACCTGGACGA GGAAGGCCAA GAGCTGCTGG CCTTCGTCAA GCGCCTGACG
CGCCTGCGCC TGGCCTACCC GGTGCTGCGC CGCTCGCGCT TTCTGGTGGG TGACTACAAT
GAGGCAATTG GGGTCAAGGA CGTGACCTGG CTGGCACCCG ATGGCAGCGA GATGAGCGTT
GAGCAATGGG AAGACCCACA CGGGCGTTGC CTGGGCATGC TGATAGATGG CCGGGCGCAG
GTCAGCGGTA TCGCCCGGCC AGGTGCCGAG GCCACCGTGT TGCTGATCGT CAATGCCCAC
CATGACATCG TGCCATTCAA GCTACCGGCC GTGCCCGAAG GCGATTACTG GAGCTGCCTG
GTCGATACCG ACCGGCCGGA GTTGCGCAAG GGGCAGCACC TGCAATTCGA TAGTACGTTC
GAGGTGAAGG GTCGGTCGAT GCTGCTGATG GTGTTGCAGT ACGACGAGGA GTGA
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| Protein sequence | MSPRTPKKTR SVAPSRIREG MPFPLGATWD GLGVNFALFS ANATKVELCL FDSTGEQELE
RIELPEYTDE IYHGYLPDAH PGLVYGYRVY GPYEPENGHR FNPNKLLIDP YAKQLVGSLK
WSEALFGYTI GHPDGDLSFD ERDSAPFVPK CKVIDPAFTW GRDQRVQIPW ERTIIYEAHA
RGISMRHPAV PEELRGTFAG LANDELLKHI KDLGVSSIEL LPIHAFVNDQ HLLDKGLNNY
WGYNSIAFFA PHPRYLASGK IAEFKEMVAH LHDAGLEVIL DVVYNHTAEG NERGPTLSMR
GIDNASYYRL MPDDKRYYIN DSGTGNTLDL SHPCVLQLVT DSLRYWAGEM HVDGFRFDLA
TILGRYHDGY SERHGFLVAC RQDPMLSQVK LIAEPWDCGP GGYQVGNFAP GWAEWNDRFR
DTARAFWKGD EGQLADFAAR LTASGDMFNN RGRRPYSSVN FITAHDGFTL RDLVSYNHKH
NEDNDENNQD GTDNNLSWNC GVEGPTDDPA INALRMRQMR NYFATLLLAQ GTPMIVAGDE
FSRTQHGNNN AYCQDSEIGW VNWDLDEEGQ ELLAFVKRLT RLRLAYPVLR RSRFLVGDYN
EAIGVKDVTW LAPDGSEMSV EQWEDPHGRC LGMLIDGRAQ VSGIARPGAE ATVLLIVNAH
HDIVPFKLPA VPEGDYWSCL VDTDRPELRK GQHLQFDSTF EVKGRSMLLM VLQYDEE
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