| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4041 |
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| Symbol | |
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| ID | 1042162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 4553126 |
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| End bp | 4555006 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637147448 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | NP_746167 |
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| Protein GI | 26990742 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCACCGG TTGGGGTGAG AGGTTTGCAA GCCTGTGCCG GCCCTTTCGC GGGCAAGCAC
AGGCAACCAC ACAAAGGAGA CTCGATGCCT GCCCAAATCG AAGACTACGC CCTGCTGGGC
AATTGCCGCA GTGCGGCGCT GGTCAGCCGC GATGGCGCGC TGGACTGGCT GTGCCTGCCA
CGCTTCGACG CCCCCGCGGT GTTCGCGGCC CTGCTGGGCA ACGAAGAAAA TGGCCGCTGG
CGCCTGGCCC CTTGCGACCC GGTAACGCAC AGCAGCCGCC AATACCTGGG CGACACCCTG
GTGCTGGAAA CCACTTGGGT CACCGCCAGC GGTCGTGCCC GGGTGCTCGA CTTCATGCCC
CTGGGCGAAG TCAATTCGGT GGTGCGCATC GTCGAAGGCT TGTCTGGCGA AACCCATTTC
GAAATGGACC TGGTCATGCG CTTCGACTAC GGCCGCAGCG TGCCCTGGGT GGAACGGCTC
GACCCACTGA CCCTCAGTGC CGTCGCCGGC CCTGACCGGT TGATCCTGTG CAGCACCGTG
CCCCCGCAAG CCCGCGACCA CCATACCGGC TGCCGCTTTC GCGTCAGCAC GGGCCAGCGC
CAGGTCTTCA GCCTGCGTCA CCAGCCCTCG CACTTGCCGG TGCAGCCTGA CTGCAACATC
GACCAAGCCC TGGCAAACAC TTGCGAGCAA TGGCAGGCCT TCGCCGACCG CTGCCCGCAG
GTAGGACCGT ATACCGCCCT GGTGCGCCGC TCGCTGCTCA CCCTCAAGGC CATGACCTAC
GCTCCCACCG GCGGTATTGT CGCTGCCGTC ACCACGTCGC TGCCCGAGCG TGTGGGCGGC
GAGCGCAACT GGGACTACCG CTTCTGCTGG CTGCGCGACG CGACCATGAC CCTGCTGGCC
TTCATGAACC TTGGCTACTT CGACGAGGCC CAGGCCTGGC GCGAGTGGCT GCTGCGCTCG
GTGGCCGGTA ACCCTGAGCA GATGCAGATC ATGTATGGCC TGGCTGGCGA GCGTGACCTG
CAGGAGTACA CCTTGCCGTG GCTGGCCGGT TATGAGCATT CTCAGCCTGT GCGGGTGGGT
AACGCCGCCT CGGCGCAGAG GCAACTGGAC ATCTATGGCG AACTGGCCGA TGCGATGACC
CAGGCGATCA AGGGCGGGTT GCCCCGCCAC CCGCGCAGCG CCGCCATTTC GCGCTTGATA
TTGCCTTATG TCGAACGTAT CTGGCGCGAG CCGGACGAAG GCATCTGGGA AGTGCGTGGC
GGCCGGCAGC AGTTCGTGCA CTCCAAGGTG ATGGCCTGGG TCGCCTTCGA CCGCGCCGCA
GGGCTGGCCG ACACCACGGA AGAAGGCCGC GAGCGTGGGC AGCATTATCG CCAGGTGGCT
GACGAGATTC ACCGCGACGT GTGCGAGCAC GGCCTCGACC CCAGCGGCCG GTTCTTCGTC
CATGCCTATG GTTCTACCGA AATGGACGCC AGCCTGTTGC AGATCGCCCT GACCGGCTTC
CTGCCGGCGG ATGACCCACG CTTCATGCGC ACCCTCGAAC AGATCGAACA GCGTCTGATG
AAGAACGGCC TGCTGCTGCG CTATGACAGT GACAGCTGCA GCGACGGCCT GACGCCGGGA
GAGGGCACCT TCCTGGTGTG TTCGTTCTGG CTGGCTGACG TTTATGTGTT ACTGGGGCGC
CAGGCCAAAG CCGAAGCGCT GTACCAACAC CTGACCGGCC TGTGCAACGA CCTCGGCCTG
CTGGCCGAAC AGTACGACCC GGCCGGCCAG CGCATGCTCG GCAACTTCCC CCAGGCCTTC
AGCCAGATAG GCATCATCAA CACCGCGCTG AATCTGCACC GCGCACAGTG CCCGGCGCGC
GACCGGGCGC GTTGTGGGTA G
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| Protein sequence | MAPVGVRGLQ ACAGPFAGKH RQPHKGDSMP AQIEDYALLG NCRSAALVSR DGALDWLCLP
RFDAPAVFAA LLGNEENGRW RLAPCDPVTH SSRQYLGDTL VLETTWVTAS GRARVLDFMP
LGEVNSVVRI VEGLSGETHF EMDLVMRFDY GRSVPWVERL DPLTLSAVAG PDRLILCSTV
PPQARDHHTG CRFRVSTGQR QVFSLRHQPS HLPVQPDCNI DQALANTCEQ WQAFADRCPQ
VGPYTALVRR SLLTLKAMTY APTGGIVAAV TTSLPERVGG ERNWDYRFCW LRDATMTLLA
FMNLGYFDEA QAWREWLLRS VAGNPEQMQI MYGLAGERDL QEYTLPWLAG YEHSQPVRVG
NAASAQRQLD IYGELADAMT QAIKGGLPRH PRSAAISRLI LPYVERIWRE PDEGIWEVRG
GRQQFVHSKV MAWVAFDRAA GLADTTEEGR ERGQHYRQVA DEIHRDVCEH GLDPSGRFFV
HAYGSTEMDA SLLQIALTGF LPADDPRFMR TLEQIEQRLM KNGLLLRYDS DSCSDGLTPG
EGTFLVCSFW LADVYVLLGR QAKAEALYQH LTGLCNDLGL LAEQYDPAGQ RMLGNFPQAF
SQIGIINTAL NLHRAQCPAR DRARCG
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