Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4038 |
Symbol | |
ID | 1042076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4550629 |
End bp | 4551903 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637147446 |
Product | dihydropyrimidine dehydrogenase |
Protein accession | NP_746165 |
Protein GI | 26990740 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0167] Dihydroorotate dehydrogenase |
TIGRFAM ID | [TIGR01037] dihydroorotate dehydrogenase (subfamily 1) family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGACT TGTCTATCGT ATTTGCCGGC ATCAAGGCAC CCAACCCCTT CTGGCTGGCC TCCGCACCGC CAACCGACAA GGCCTACAAC GTGGTCCGCG CCTTCGAGGC CGGCTGGGGC GGCGTGGTCT GGAAGACCCT GGGCGAAGAC CCTGCGGCGG TCAACGTGTC GTCGCGCTAC TCGGCGCACT ATGGCCCCAA CCGTCAGGTA CAGGGGATCA ACAATATCGA GTTGATCACC GACCGCTCTC TGGAAATCAA CCTGCGTGAA ATCACCCAGG TGAAGAAGGA CTGGCCCGAC CGCGCACTGA TCGTGTCGCT GATGGTGCCG TGCATAGAGG AATCGTGGAA GTTCATCCTG CCGCTGGTGG AAGCCACGGG GGCCGATGGC ATCGAGCTGA ACTTCGGTTG CCCGCACGGT ATGCCGGAGC GCGGCATGGG GGCGGCCGTC GGCCAGGTGC CGGAATATGT GGAAATGGTC ACCCGCTGGT GCAAGACGTA CTGCGCGCTG CCGGTGATCG TGAAGCTTAC GCCGAACATC ACCGATATCC GCCAGTCGGC CCGCGCCGCG CATCGAGGCG GGGCCGATGC CGTGTCGTTG ATCAACACCA TCAACTCCAT CACCAGCGTC GACCTGGACC GCATGGTGGC CCACCCGATC GTCGGAGACC AGAGCACCCA TGGCGGTTAC TGCGGTTCGG CAGTGAAGCC GATTGCCTTG AACATGGTGG CGGAAATCGC CCGCGACCCG GAAACGCGGG GCTTGCCGAT TTGTGGCATT GGCGGCATCG GCAACTGGCG TGACGCCGCC GAGTTCATGG CCTTGGGCAG TGGCGCCGTG CAGGTGTGCA CGGCGGCGAT GCTGCATGGC TTCCGTATCG TCGAGGACAT GCAGGACGGC CTGGCACGCT GGATGGACCA GCATGGGCAT GCCACTGTCG AAGCGTTCCG CGGGCAGGCG GTGGGGCATA CCACCGACTG GAAATACCTG GACATCAACT ACAAGTCGGT CGCGCACATT GACCAGGAGG CGTGCATTGG CTGCGGGCGC TGCCACATTG CGTGCGAGGA CACCTCGCAC CAGGCGATTG CCAGCACGCT GAAGGCTGAC GGCACGCATG CCTACAGTGT GATCGAAGAG GAATGCGTAG GCTGTAACCT GTGCCAGATC ACCTGCCCGG TGGAAAACTG CATCGAAATG GAGGCACAGG ATACCGGCAA GCCGTACCTG AACTGGACGC AGGATCCGCG TAACCCCTAC CGTGAGGCCA GTTGA
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Protein sequence | MADLSIVFAG IKAPNPFWLA SAPPTDKAYN VVRAFEAGWG GVVWKTLGED PAAVNVSSRY SAHYGPNRQV QGINNIELIT DRSLEINLRE ITQVKKDWPD RALIVSLMVP CIEESWKFIL PLVEATGADG IELNFGCPHG MPERGMGAAV GQVPEYVEMV TRWCKTYCAL PVIVKLTPNI TDIRQSARAA HRGGADAVSL INTINSITSV DLDRMVAHPI VGDQSTHGGY CGSAVKPIAL NMVAEIARDP ETRGLPICGI GGIGNWRDAA EFMALGSGAV QVCTAAMLHG FRIVEDMQDG LARWMDQHGH ATVEAFRGQA VGHTTDWKYL DINYKSVAHI DQEACIGCGR CHIACEDTSH QAIASTLKAD GTHAYSVIEE ECVGCNLCQI TCPVENCIEM EAQDTGKPYL NWTQDPRNPY REAS
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