Gene PP_4013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4013 
Symbol 
ID1046545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4524568 
End bp4525008 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content66% 
IMG OID637147424 
ProductNUDIX hydrolase 
Protein accessionNP_746143 
Protein GI26990718 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.149682 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.155125 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTGGC AACCCCACAT CACCGTCGCC ACCATCGTCG AGCACGAAGG CAAGTTCCTC 
TTCGTCGAGG AATTCAAAGC CAACCAGCAC GTCTTCAACC AGCCTGCCGG CCACCTCGAA
CCCAACGAGA CCCTGCCCCA GGCCGCCCTG CGCGAAACCC TGGAAGAAAC CGCCTGGGAA
GTCGAGCTGA CCGGCGTGGT CGGCATCTAC CTGTACACCG CCCCCAGCAA CGGCGTGACC
TACCAGCGCG TCTGCTTCGC CGCCCGCCCC GTGCGCCATC ACGCCGACCT GGCACTGGAC
AGCGATATCG TCCGCGCCGT GTGGCTGACC CGCGACGAAC TGCTGGCCGA CCCCACTCGC
TGGCGCAGCG AGCTGGTGCC GCGCTGCCTG GATGACTACC TCAAAGGCCC GCTGCACAGC
CTCGACCTGC TACGCGACTG A
 
Protein sequence
MTWQPHITVA TIVEHEGKFL FVEEFKANQH VFNQPAGHLE PNETLPQAAL RETLEETAWE 
VELTGVVGIY LYTAPSNGVT YQRVCFAARP VRHHADLALD SDIVRAVWLT RDELLADPTR
WRSELVPRCL DDYLKGPLHS LDLLRD