Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4009 |
Symbol | clpS |
ID | 1046550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 4519549 |
End bp | 4519911 |
Gene Length | 363 bp |
Protein Length | 120 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637147420 |
Product | ATP-dependent Clp protease adaptor protein ClpS |
Protein accession | NP_746139 |
Protein GI | 26990714 |
COG category | [S] Function unknown |
COG ID | [COG2127] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.102583 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATGCAC CTAGTGAGAT TCGACTAACA TTCAATCAGG ATCGCCCGCA ATCGAATGAG GACGACGGCT CAGGTCTTGC AGTTCAGGAA GCCAAGCCGA TCCTGCAGGC GCCACCGATG TACAAGGTGG TTTTGTTCAA CGATGACTAC ACACCAATGG ATTTCGTCGT CGAAGTGCTC GAGACGTTCT TCAGTCTGAA CCGCGAGCTG GCGACCAAGA TCATGCTGAC CGTCCATACC GAGGGGCGGG CAGTGTGCGG ATTGTTTACC CGTGACATCG CCGAAACAAA GGCCATGCAG GTCAACCAAT ACGCCAGGGA AAGCCAGCAT CCGCTACTCT GTGAAATCGA GAAGGACGGT TAA
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Protein sequence | MHAPSEIRLT FNQDRPQSNE DDGSGLAVQE AKPILQAPPM YKVVLFNDDY TPMDFVVEVL ETFFSLNREL ATKIMLTVHT EGRAVCGLFT RDIAETKAMQ VNQYARESQH PLLCEIEKDG
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