Gene PP_4005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4005 
Symbolaat 
ID1046557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4515398 
End bp4516078 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content66% 
IMG OID637147416 
Productleucyl/phenylalanyl-tRNA--protein transferase 
Protein accessionNP_746135 
Protein GI26990710 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2360] Leu/Phe-tRNA-protein transferase 
TIGRFAM ID[TIGR00667] leucyl/phenylalanyl-tRNA--protein transferase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00329233 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTCACCT GGCTGACCCG CGACTCGCTG ACCTTCCCGC CCCTGGAAAA GGCGCTGCAC 
GACCCCAACG GCCTACTGGC CGCCGGCGGC GACCTGAGCC CCGAGCGCCT GGTGCAGGCG
TATCGCCATG GCTGCTTTCC GTGGTACCAG GACGGCCAAC CGATCCTGTG GTGGTCACCC
GACCCGCGCA CGGTGTTGTT GCCTGACCAG TTGCATGTGT CACGCTCGCT GGCCAAGCTG
ATGCGCCAAG GCCGCTACCA GGTCAGCTTC GACACCGACT TCCCGGCCGT GATCGCCGCC
TGCGCCGCGC CTCGCGACTA CGCTGACGGC ACCTGGATCA CCGACACCAT GCGCAACGCC
TACTGCGAAC TGCACCGCCG TGGCATCGCC CATTCGGTCG AAGTTCGCCA GGACGGCGAA
CTGGTCGGGG GCCTGTACGG TCTGGCCATG GGCCAGCTGT TCTTTGGCGA ATCGATGTTC
AGCCGCGCCG ACAACGCCTC CAAGGTCGGT TTCGTGACCT TGGTCAACCA CCTGCGAGAC
GCCGGCTTCG TGCTTATCGA CTGCCAGATG CCGACCAACC ACCTGCACAG CCTGGGCGCC
CACGCCATCA GCCGTGCCGA GTTCGCCAGC TACCTGGCAC GCCACCTTGA CCAGCCCAAC
AGCGCTTCAT GGGTTGCCTA G
 
Protein sequence
MLTWLTRDSL TFPPLEKALH DPNGLLAAGG DLSPERLVQA YRHGCFPWYQ DGQPILWWSP 
DPRTVLLPDQ LHVSRSLAKL MRQGRYQVSF DTDFPAVIAA CAAPRDYADG TWITDTMRNA
YCELHRRGIA HSVEVRQDGE LVGGLYGLAM GQLFFGESMF SRADNASKVG FVTLVNHLRD
AGFVLIDCQM PTNHLHSLGA HAISRAEFAS YLARHLDQPN SASWVA