| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4003 |
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| Symbol | lolA |
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| ID | 1046559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 4511800 |
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| End bp | 4512486 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637147414 |
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| Product | outer-membrane lipoprotein carrier protein |
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| Protein accession | NP_746133 |
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| Protein GI | 26990708 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
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| TIGRFAM ID | [TIGR00547] periplasmic chaperone LolA |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0440839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00291295 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAACACCC TGCCTGGCGC CAACGGTGGC GCCAGGCCTT TTCAACGCTC AATGAGGATT
CCCATGCGCG CGATTCGCAT GCTGTTGGTT TCTGCCCTGA CCCTGGGCTC GGTTACTGCT
TATGCCGGTG AGCAAGACGT ACAACGCCTG ACCCAGTTGC TGGAAAAGTC GCAGACCATC
GAGGCCAACT TCTCCCAGCT GACCCTGGGC GCCGATGGCA CCAGCCTGCA GGAAACCTCG
GGCAAGATGA CGGTCAAGCG CCCGGGCCTG TTCTACTGGC ACACCGATGC ACCGCAGGAG
CAGGTGGTGG TGTCGGACGG CAAGAACGTC ACCCTGTGGG ACCCGGACCT GGAACAGGCC
ACCATCAAGA AGCTCGACGT GCGCCTGAAC CAGACCCCGG CCTTGTTGCT GTCCGGTGAC
GTGTCGAAGA TCAGCCAGAG CTTTGATATT GCGTCCAAGG AGCAGGGCGA AGTAATGGAC
TTCACCCTCA AGCCAAAGAC CAAGGACACC CTGTTCGACT CGCTGCGCGT GTCGTTCCGC
AAAGGCCTGA TCAATGACAT GCAGCTGATC GACAGCGTCG GCCAGCGCAC CAACATCCTG
TTCAATGGCG TCAAGGCCAA CCAGGCGGTG CCGGACAGCA AGTTCAAGTT CGACATCCCC
AAGGGCGCGG ACGTGATCAA GGAGTAA
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| Protein sequence | MNTLPGANGG ARPFQRSMRI PMRAIRMLLV SALTLGSVTA YAGEQDVQRL TQLLEKSQTI
EANFSQLTLG ADGTSLQETS GKMTVKRPGL FYWHTDAPQE QVVVSDGKNV TLWDPDLEQA
TIKKLDVRLN QTPALLLSGD VSKISQSFDI ASKEQGEVMD FTLKPKTKDT LFDSLRVSFR
KGLINDMQLI DSVGQRTNIL FNGVKANQAV PDSKFKFDIP KGADVIKE
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