Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3996 |
Symbol | |
ID | 1046566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4504894 |
End bp | 4505229 |
Gene Length | 336 bp |
Protein Length | 111 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637147407 |
Product | hypothetical protein |
Protein accession | NP_746126 |
Protein GI | 26990701 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2920] Dissimilatory sulfite reductase (desulfoviridin), gamma subunit |
TIGRFAM ID | [TIGR03342] sulfur relay protein, TusE/DsrC/DsvC family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.546162 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00513548 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATACGC TCACCGTTGG CGATCAGGTG ATCGCCCTGG ACAAGGATGG CTTCCTGGTC GATCTGCAAG ATTGGTCTCA CGACGCCGCC GAGGCTTTGG CCAAGCGCGA GGGTATCCCG TTGACGGCGG ACCACTGGGA AATCCTCGAA CTGCTCCGTC AGTTCTACCA GGAATACCAG CTGTCTCCGG CCACCCGCCC GCTGATCAAG TACACGGCCC TCAAGCTGGG CCCTGAAAAG GGCAACAGCC CGCACCTTAA CCGCCTGTTC AACGGCACCC CCGCCAAACT TGCCGCCAAG CTGGCGGGCC TGCCCAAGCC GACCAACTGC ATATGA
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Protein sequence | MNTLTVGDQV IALDKDGFLV DLQDWSHDAA EALAKREGIP LTADHWEILE LLRQFYQEYQ LSPATRPLIK YTALKLGPEK GNSPHLNRLF NGTPAKLAAK LAGLPKPTNC I
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