Gene PP_3996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3996 
Symbol 
ID1046566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4504894 
End bp4505229 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content61% 
IMG OID637147407 
Producthypothetical protein 
Protein accessionNP_746126 
Protein GI26990701 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2920] Dissimilatory sulfite reductase (desulfoviridin), gamma subunit 
TIGRFAM ID[TIGR03342] sulfur relay protein, TusE/DsrC/DsvC family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.546162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00513548 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATACGC TCACCGTTGG CGATCAGGTG ATCGCCCTGG ACAAGGATGG CTTCCTGGTC 
GATCTGCAAG ATTGGTCTCA CGACGCCGCC GAGGCTTTGG CCAAGCGCGA GGGTATCCCG
TTGACGGCGG ACCACTGGGA AATCCTCGAA CTGCTCCGTC AGTTCTACCA GGAATACCAG
CTGTCTCCGG CCACCCGCCC GCTGATCAAG TACACGGCCC TCAAGCTGGG CCCTGAAAAG
GGCAACAGCC CGCACCTTAA CCGCCTGTTC AACGGCACCC CCGCCAAACT TGCCGCCAAG
CTGGCGGGCC TGCCCAAGCC GACCAACTGC ATATGA
 
Protein sequence
MNTLTVGDQV IALDKDGFLV DLQDWSHDAA EALAKREGIP LTADHWEILE LLRQFYQEYQ 
LSPATRPLIK YTALKLGPEK GNSPHLNRLF NGTPAKLAAK LAGLPKPTNC I