Gene PP_3987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3987 
Symbol 
ID1046576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4495690 
End bp4496649 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content54% 
IMG OID637147397 
Productphage integrase family site specific recombinase 
Protein accessionNP_746117 
Protein GI26990692 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00618755 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAGCGCT TACAGCGCAT TGAGATCCCG CTCGGTACCG ACTTGGATGT AGCGAAAATT 
GAATGGGCCA AGCTCGACCG AAAGTCAGTG CCGAAAATCA CTCGCCTGCT CGGTGACGTC
TTCAATCGGT ATGAGCGTGA TGTCATCCCT GGGAAAATGC CACGCACACA AAAAGATAAC
CTGCTCTCTT TGAGGCAACT TCGCGCAGCG TTCAGTGATG CACCGATCGA CGCAATCACT
CCTCAAATAG TCGCTCAGTA CCGAGACAAG CGATCAGGCA AAGTTCGCGC CAACCGAGAG
ATATCACTTC TATCGCACAT TTATAATATG GCGCGGGAAT GGGGCATTAC CGACAGGGAA
AACCCTGCTG CTGGCGTGCG CAAGAACAAA GAGCGACCCC GTGACTTCTA TGCTGGACCG
GAGATCTGGA ACGCCGTTTA CGATCGTGCT GCCAGCGAGC TACGCGACGC TATGGATTTG
GCCTACCTGA CCGGCCAACG ACCGGCTGAT GTTCTCACCA TGAGAGCCGC AGACTGCGAC
GATAAATACC TTCAGGTCGC ACAGGGCAAG ACATCTAAGA AGCTGCGGAT TGAGCTCCGC
TCCGGGGAGC AAGTTAACCA CCTCGGTCTG CTCATAGAAC GCCTGTTGGC TCAGCGGAAG
GAGCGCGGAG TTTGCAATCC TTATCTAATC ACTACACAAG ACGGTAGAGC TGTCACGGCG
TCAATGCTTC GTCTTCGCTT CGACGACGCC AGGAAGACCG CGATTCGGCA TGCTCTTGTG
GGTGAGGACA AGGTTCTAGC TGAGCGCATT CGTCAGTTCC AGTTCAGGGA CATACGCCCC
AAGGCGGCAA GCGAAATCGG CGATTTGGGT CACGCAAGCC GCCTATTGGG TCACACTGAC
AAGCGCATCA CACAAACGGT ATATAGACGA GTAGGTGAAA TCGTACAGCC AACACGATAG
 
Protein sequence
MERLQRIEIP LGTDLDVAKI EWAKLDRKSV PKITRLLGDV FNRYERDVIP GKMPRTQKDN 
LLSLRQLRAA FSDAPIDAIT PQIVAQYRDK RSGKVRANRE ISLLSHIYNM AREWGITDRE
NPAAGVRKNK ERPRDFYAGP EIWNAVYDRA ASELRDAMDL AYLTGQRPAD VLTMRAADCD
DKYLQVAQGK TSKKLRIELR SGEQVNHLGL LIERLLAQRK ERGVCNPYLI TTQDGRAVTA
SMLRLRFDDA RKTAIRHALV GEDKVLAERI RQFQFRDIRP KAASEIGDLG HASRLLGHTD
KRITQTVYRR VGEIVQPTR