Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3987 |
Symbol | |
ID | 1046576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4495690 |
End bp | 4496649 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637147397 |
Product | phage integrase family site specific recombinase |
Protein accession | NP_746117 |
Protein GI | 26990692 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00618755 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAGCGCT TACAGCGCAT TGAGATCCCG CTCGGTACCG ACTTGGATGT AGCGAAAATT GAATGGGCCA AGCTCGACCG AAAGTCAGTG CCGAAAATCA CTCGCCTGCT CGGTGACGTC TTCAATCGGT ATGAGCGTGA TGTCATCCCT GGGAAAATGC CACGCACACA AAAAGATAAC CTGCTCTCTT TGAGGCAACT TCGCGCAGCG TTCAGTGATG CACCGATCGA CGCAATCACT CCTCAAATAG TCGCTCAGTA CCGAGACAAG CGATCAGGCA AAGTTCGCGC CAACCGAGAG ATATCACTTC TATCGCACAT TTATAATATG GCGCGGGAAT GGGGCATTAC CGACAGGGAA AACCCTGCTG CTGGCGTGCG CAAGAACAAA GAGCGACCCC GTGACTTCTA TGCTGGACCG GAGATCTGGA ACGCCGTTTA CGATCGTGCT GCCAGCGAGC TACGCGACGC TATGGATTTG GCCTACCTGA CCGGCCAACG ACCGGCTGAT GTTCTCACCA TGAGAGCCGC AGACTGCGAC GATAAATACC TTCAGGTCGC ACAGGGCAAG ACATCTAAGA AGCTGCGGAT TGAGCTCCGC TCCGGGGAGC AAGTTAACCA CCTCGGTCTG CTCATAGAAC GCCTGTTGGC TCAGCGGAAG GAGCGCGGAG TTTGCAATCC TTATCTAATC ACTACACAAG ACGGTAGAGC TGTCACGGCG TCAATGCTTC GTCTTCGCTT CGACGACGCC AGGAAGACCG CGATTCGGCA TGCTCTTGTG GGTGAGGACA AGGTTCTAGC TGAGCGCATT CGTCAGTTCC AGTTCAGGGA CATACGCCCC AAGGCGGCAA GCGAAATCGG CGATTTGGGT CACGCAAGCC GCCTATTGGG TCACACTGAC AAGCGCATCA CACAAACGGT ATATAGACGA GTAGGTGAAA TCGTACAGCC AACACGATAG
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Protein sequence | MERLQRIEIP LGTDLDVAKI EWAKLDRKSV PKITRLLGDV FNRYERDVIP GKMPRTQKDN LLSLRQLRAA FSDAPIDAIT PQIVAQYRDK RSGKVRANRE ISLLSHIYNM AREWGITDRE NPAAGVRKNK ERPRDFYAGP EIWNAVYDRA ASELRDAMDL AYLTGQRPAD VLTMRAADCD DKYLQVAQGK TSKKLRIELR SGEQVNHLGL LIERLLAQRK ERGVCNPYLI TTQDGRAVTA SMLRLRFDDA RKTAIRHALV GEDKVLAERI RQFQFRDIRP KAASEIGDLG HASRLLGHTD KRITQTVYRR VGEIVQPTR
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