Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3986 |
Symbol | |
ID | 1046577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 4495258 |
End bp | 4495614 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637147396 |
Product | ISPpu13, transposase Orf1 |
Protein accession | NP_746116 |
Protein GI | 26990691 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00590641 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGACCCG ACGCCAAAGT CGAAAAAGTG TACCTCTACC CCAAGCCCGT CGACTTTCGA AAATCCATCG ATGGCCTGGC CGCGCTGGTC GAACTCGATA TCAAGGTGGC GGTGTTCGAC CCAGTGCTTT TCGTCTTCCT CAACAAGCCT CGCAATCGCG TGAAAATCCT TTATTGGGAG CGAAACGGCT TCTGCCTCTG GCTCAAGCGC CTGGAGTCCG AACGTTTCAA AACTTCACCT GATCCGACTG ACGTCGCCAT TGTCCTGACC GTTCAGGAAC TGAACTGGCT GCTCGATGGC TTCGACCTCT GGCGCAACCG TCCGCATCAG GTTTTGACGC CTCGATACGT CGCCTGA
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Protein sequence | MRPDAKVEKV YLYPKPVDFR KSIDGLAALV ELDIKVAVFD PVLFVFLNKP RNRVKILYWE RNGFCLWLKR LESERFKTSP DPTDVAIVLT VQELNWLLDG FDLWRNRPHQ VLTPRYVA
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