Gene PP_3986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3986 
Symbol 
ID1046577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4495258 
End bp4495614 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content56% 
IMG OID637147396 
ProductISPpu13, transposase Orf1 
Protein accessionNP_746116 
Protein GI26990691 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00590641 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGACCCG ACGCCAAAGT CGAAAAAGTG TACCTCTACC CCAAGCCCGT CGACTTTCGA 
AAATCCATCG ATGGCCTGGC CGCGCTGGTC GAACTCGATA TCAAGGTGGC GGTGTTCGAC
CCAGTGCTTT TCGTCTTCCT CAACAAGCCT CGCAATCGCG TGAAAATCCT TTATTGGGAG
CGAAACGGCT TCTGCCTCTG GCTCAAGCGC CTGGAGTCCG AACGTTTCAA AACTTCACCT
GATCCGACTG ACGTCGCCAT TGTCCTGACC GTTCAGGAAC TGAACTGGCT GCTCGATGGC
TTCGACCTCT GGCGCAACCG TCCGCATCAG GTTTTGACGC CTCGATACGT CGCCTGA
 
Protein sequence
MRPDAKVEKV YLYPKPVDFR KSIDGLAALV ELDIKVAVFD PVLFVFLNKP RNRVKILYWE 
RNGFCLWLKR LESERFKTSP DPTDVAIVLT VQELNWLLDG FDLWRNRPHQ VLTPRYVA