Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3974 |
Symbol | |
ID | 1046589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4481994 |
End bp | 4482980 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637147384 |
Product | LysR family transcriptional regulator |
Protein accession | NP_746104 |
Protein GI | 26990679 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.140467 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGTCG TGAAGCCGTC ACCTGGAAGT GCCCAGTCGA TCCCTGCAAA TGCCAACGGC CCGAAATGGG ATGTCGGCGA AGCTGTCAGC CAACTATCCT GGGACGACTT GCGGATCATC AAAACGCTGA GTGATTGCAG CAACCGCGCC GCTACGGCCA AGAAGCTCGG CATCAATGTG TCCACCGTAT CGCGCCGGGT CGCGCAAGTT GAGAAGACGC TTGGGGTCGC GCTTTTCGAT CATCGCAAGG CGGGGTATCT GCTGACTGCC GAAGGCGTCG AGCTGCGTGC GCTGGCCGAG CGCGTTGAGC TGGACATCGT CAGTGTCACC CGCAGGGTGT CCCGCGCCGG CCAGGGCCCC TTGGGAAAGC TGCGAATCAC TACCAGCGAC TCGCTGCTGT TGTACTTTCT CACGCCGATC ATCGCGGACT TCAAAGCCCT CAATGAGGGG ATTACCATCG AGGTGTTGGT CGGCAACCAG ACGTTGAGTT TGGCAAGGGA CGAGTCGGAT ATTGCGGTAC GCGCGACCAA AAAACCAACG GACACCCTCG TGGGCCGCAA GCTCGCCAAC ATCGCGTGGG CGGCATATGG CAGCGTCAAG CAGGCGGCGA TTACCGATCC CTTCGCTGAG GGTCAGGCAT GGGTATCCTA CTCGGGAGGC TTGTGCGGTT TGAAGGCAAC AAGCTACGTC GAATGTCGGG TGCCCTCGGA GCTTATTTCT TACCGCACTG ATTCCGTGGC GGCAGCAAGT GCCGCTATTG CGGCGGGCCT GGGTTTTGGT TTCCTCCCCT GCATGCTGGG CGACATTACC CCCGGATTGG TTCGAGCCGG CCCAGTGGTG CAGGAGCTTC AGGATGAGTT GTGGCTGCTC ACCCACCAGG ACATCAGAAA GTCCTGGCGG GTAAAAGCAT TCATGACGTT CTGCGCGGCT GCCGTGGCCG ACCTCAAACC TTTGGTCGAA GGTCAGCAGG CCATCCCTGC TTCCTAG
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Protein sequence | MIVVKPSPGS AQSIPANANG PKWDVGEAVS QLSWDDLRII KTLSDCSNRA ATAKKLGINV STVSRRVAQV EKTLGVALFD HRKAGYLLTA EGVELRALAE RVELDIVSVT RRVSRAGQGP LGKLRITTSD SLLLYFLTPI IADFKALNEG ITIEVLVGNQ TLSLARDESD IAVRATKKPT DTLVGRKLAN IAWAAYGSVK QAAITDPFAE GQAWVSYSGG LCGLKATSYV ECRVPSELIS YRTDSVAAAS AAIAAGLGFG FLPCMLGDIT PGLVRAGPVV QELQDELWLL THQDIRKSWR VKAFMTFCAA AVADLKPLVE GQQAIPAS
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