Gene PP_3962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3962 
Symbol 
ID1046601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4471971 
End bp4472792 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content57% 
IMG OID637147372 
Productputative lipoprotein 
Protein accessionNP_746092 
Protein GI26990667 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.34998 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGGACAC TAGCTAGAGC CACTCTCATG CCACAACTCA TCAGATTTAT AACCCTTCCC 
CTGGCCTGTA GTCTTCTGTG GGCTTGCTCT GCTCCTGAGA CGAAGTCGCC TGTGGAGACG
CCTGGCAGGC CCGAAACCGC AAAGACTCAG TTGCTGGAAG CCGGCGCCGC GACCTTGCAG
GCCAAGCCGC CCATTGAGGC CATCAACGCC TACCTGGATG GCTTCCACTT TTACAACGGA
CATCCTGATG TGCAGATGGA AGCGCATCAC TACTGCTCCA TCCTGAATGA GGATGTCATC
CAGTGCGTCA TCTTCGACGG TAATACCAAG GAAGCGAAGA TCATGGGTGT CGAGTACATC
ATCGACGAAA AGCTGTTTGC TGGTCTGCCG GCCAACGAGA AGGCGATGTG GCACAGCCAC
GGCTATGAAG TCTCGTCCGG TCAGTTGGTT GCACCAGGCA TACCCGCGAC TGCTGAGCAT
GCGCTGATGG AGCGGCTTGC CCATACCTAC GGGAAGACAT GGCACACGTG GCACACCGAC
CAAGATAAAG CTCTTCCTGT GGGCGTTCCG CAGTTGATGA TGGGGTTCAC AATGGATGGC
CAGGCTGACC CGGCGATGGT CGAGCAGCGC AATCGCCGTC TGGGGGTGGA TGCGGCAAAA
ACCAAAGCTC AGCGGGCTGA CATTCAAATC CCTGCGGCTG ATCCCAAGGC GGATGGTTGG
CAACACGGCA ACGTTATTCA GATCACCGAT CCAACAGGTG TTCATCTGCA TCGGCCCGCC
ACGTCGATAT CTGAGAAAGC GAACAGCCGT TCCAGCCAAT AG
 
Protein sequence
MRTLARATLM PQLIRFITLP LACSLLWACS APETKSPVET PGRPETAKTQ LLEAGAATLQ 
AKPPIEAINA YLDGFHFYNG HPDVQMEAHH YCSILNEDVI QCVIFDGNTK EAKIMGVEYI
IDEKLFAGLP ANEKAMWHSH GYEVSSGQLV APGIPATAEH ALMERLAHTY GKTWHTWHTD
QDKALPVGVP QLMMGFTMDG QADPAMVEQR NRRLGVDAAK TKAQRADIQI PAADPKADGW
QHGNVIQITD PTGVHLHRPA TSISEKANSR SSQ