Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3962 |
Symbol | |
ID | 1046601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4471971 |
End bp | 4472792 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637147372 |
Product | putative lipoprotein |
Protein accession | NP_746092 |
Protein GI | 26990667 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.34998 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGGACAC TAGCTAGAGC CACTCTCATG CCACAACTCA TCAGATTTAT AACCCTTCCC CTGGCCTGTA GTCTTCTGTG GGCTTGCTCT GCTCCTGAGA CGAAGTCGCC TGTGGAGACG CCTGGCAGGC CCGAAACCGC AAAGACTCAG TTGCTGGAAG CCGGCGCCGC GACCTTGCAG GCCAAGCCGC CCATTGAGGC CATCAACGCC TACCTGGATG GCTTCCACTT TTACAACGGA CATCCTGATG TGCAGATGGA AGCGCATCAC TACTGCTCCA TCCTGAATGA GGATGTCATC CAGTGCGTCA TCTTCGACGG TAATACCAAG GAAGCGAAGA TCATGGGTGT CGAGTACATC ATCGACGAAA AGCTGTTTGC TGGTCTGCCG GCCAACGAGA AGGCGATGTG GCACAGCCAC GGCTATGAAG TCTCGTCCGG TCAGTTGGTT GCACCAGGCA TACCCGCGAC TGCTGAGCAT GCGCTGATGG AGCGGCTTGC CCATACCTAC GGGAAGACAT GGCACACGTG GCACACCGAC CAAGATAAAG CTCTTCCTGT GGGCGTTCCG CAGTTGATGA TGGGGTTCAC AATGGATGGC CAGGCTGACC CGGCGATGGT CGAGCAGCGC AATCGCCGTC TGGGGGTGGA TGCGGCAAAA ACCAAAGCTC AGCGGGCTGA CATTCAAATC CCTGCGGCTG ATCCCAAGGC GGATGGTTGG CAACACGGCA ACGTTATTCA GATCACCGAT CCAACAGGTG TTCATCTGCA TCGGCCCGCC ACGTCGATAT CTGAGAAAGC GAACAGCCGT TCCAGCCAAT AG
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Protein sequence | MRTLARATLM PQLIRFITLP LACSLLWACS APETKSPVET PGRPETAKTQ LLEAGAATLQ AKPPIEAINA YLDGFHFYNG HPDVQMEAHH YCSILNEDVI QCVIFDGNTK EAKIMGVEYI IDEKLFAGLP ANEKAMWHSH GYEVSSGQLV APGIPATAEH ALMERLAHTY GKTWHTWHTD QDKALPVGVP QLMMGFTMDG QADPAMVEQR NRRLGVDAAK TKAQRADIQI PAADPKADGW QHGNVIQITD PTGVHLHRPA TSISEKANSR SSQ
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