| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3953 |
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| Symbol | |
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| ID | 1046611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 4458975 |
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| End bp | 4460429 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637147363 |
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| Product | TrkH family potassium uptake protein |
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| Protein accession | NP_746083 |
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| Protein GI | 26990658 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.433351 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCTTC CTGCATTGCG TTTCATCGCC TTCATTATTG GTGTATTCCT GATCACGTTG
GCCGTCAGCA TGGTGATTCC AATGCTGACG CTGCTGGTGT ACGACCGCAG CGACGACCTC
GGTGCATTCG TCTGGTCGAG CCTGATCGTT CTGTGTGTCG GCCTGCTCAT GGTGGCCCGC
GGCGTACCCG ACACACCGCA ACTGCGGACC AGGGACATGT ATCTGCTCAC GACGGCAAGC
TGGGTCATCG TGTGCGCATT CGCGGCGCTG CCAATGGTGT TCATTCGACA CATCAGTTAC
ACGGACGCGT TCTTCGAAAC CATGTCGGGA ATCACCACCA CCGGCTCGAC CGTGCTGACC
GGCCTGGACA GTGCATCGCC GGGGCTGCTG ATATGGCGTT CGCTGCTGCA CTGGCTGGGA
GGCATTGGTT TTATCGGCAT GGCCGTGGCG ATCCTGCCAC TGCTGCGCGT GGGCGGCATG
CGCCTGTTCC AGACCGAGTC TTCGGATTGG TCTGACAAAG TGACGCCGCG TTCGCATGTG
GCAGCCAAGA TAATCCTGCT GGTCTATCTG GGCCTGACTG CATTGGGGAC GGGGGCATTG
TGGGCTGCCG GCATGACCCC GTTCGAAGCC ATCAATCATT CGATGTCGCT GGTTTCAACC
GGTGGTTTCT CTACCTCGGA TGCCTCGCTG GGCCATTGGG AGCAGCCAGC GGTGCACTGG
GTGGCTGTGG TCATCATGAT ACTCGGCAGC CTGCCCTTCA CATTGTATGT CGCCACGCTG
CGTGGCCATC GAGGCATCCT GCTCAAGGAC CATCAAGTTC GCGGTTTCAT TGGTTTTCTC
GTCTTCGTCT GGCTCACCGT CGGAACCTGG CTCTGCCTGC ACAGCAATCT GGCCTGGTGG
GATGCGTTTC GTATCGTTGC GGTGAATGTG ACCTCGGTAG TAACCACAAC AGGCATTGCC
GTGGGTGATT ACACACTCTG GGGCAGCTTC GCCATCATGC TGTTCTTTTA CCTGACGTTC
GTCGGCGGGT GCTCGGGCTC CACCGCCGGC GGTTTGAAAA TATTCCGTTT CCAGGTGGCC
GCGGCCTTGC TTGTCAGCAG CCTGAAGCAG TTGATCCATC CACGGGCAAC GATCTCGAAG
AAATACAATG GGCACCCCAT CGATGAAGAG ATCGTACGGT CACTGCTGAC GTTCTCGTTC
TTCTTCACCG TCACCATTGC GGTCATCGCC CTGGGCCTGT CTTTGATAGG ACTCGACTGG
ATGACGGCGT TGAGCGGGGC GGCCACCGCC GTGTGCAACG TCGGTCCAGG CCTGGGGACG
CTTATCGGTC CAGCAGGTAA TTTCGCCTCC TTGCCGGACG CAGCGAAATG GTTGCTGACG
GTTGGCATGC TGCTTGGACG GCTCGAGATC CTCACCGTAC TGGTACTGGT CTCGCCAGTC
TTCTGGCGAT TCTAG
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| Protein sequence | MPLPALRFIA FIIGVFLITL AVSMVIPMLT LLVYDRSDDL GAFVWSSLIV LCVGLLMVAR
GVPDTPQLRT RDMYLLTTAS WVIVCAFAAL PMVFIRHISY TDAFFETMSG ITTTGSTVLT
GLDSASPGLL IWRSLLHWLG GIGFIGMAVA ILPLLRVGGM RLFQTESSDW SDKVTPRSHV
AAKIILLVYL GLTALGTGAL WAAGMTPFEA INHSMSLVST GGFSTSDASL GHWEQPAVHW
VAVVIMILGS LPFTLYVATL RGHRGILLKD HQVRGFIGFL VFVWLTVGTW LCLHSNLAWW
DAFRIVAVNV TSVVTTTGIA VGDYTLWGSF AIMLFFYLTF VGGCSGSTAG GLKIFRFQVA
AALLVSSLKQ LIHPRATISK KYNGHPIDEE IVRSLLTFSF FFTVTIAVIA LGLSLIGLDW
MTALSGAATA VCNVGPGLGT LIGPAGNFAS LPDAAKWLLT VGMLLGRLEI LTVLVLVSPV
FWRF
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