Gene PP_3946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3946 
Symbol 
ID1046618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4449008 
End bp4449484 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content65% 
IMG OID637147356 
ProductMarR family transcriptional regulator 
Protein accessionNP_746076 
Protein GI26990651 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.364439 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAAA AAACCACCCC CAGCAGCGCC CCGCTCGACA ACACCCCCTA CGACGTTACC 
GAACAGGTCG GGCACTTGCT GCGCAAGGCC TACCAACGGC ACACGGCGAT CTTCCAGCAG
CAGGCCTGCG ACCCGCAGCT TACCTCGATC CAGTTCGTCA CCCTGTGCGC CCTGCGCGAT
CACGGCCCCA GCTCCCAGGC TGAACTGATC AAGGCCACCG CGGTGGACCA GGCAACCATC
CGCGGCATCG TCGAGCGCCT GAAGGCGCGC GAGCTGGTGC AGCTTTCGCC AGACCCGGGC
GACCGGCGCA AGGTCATCGT CGAACTCACC GAAAGCGGCG CGGCCTTGCT CGATGCAATG
ATCCCCTGCG CCCGGCAGAT CAGCGAACTG AGCATGGGCA GCCTGAATGC CGGGGAGCGC
GTTGCCATTT TGTACCTGCT GCGCAAGATG ATCGACAGCG ACGAGAACGC GGGCTGA
 
Protein sequence
MSKKTTPSSA PLDNTPYDVT EQVGHLLRKA YQRHTAIFQQ QACDPQLTSI QFVTLCALRD 
HGPSSQAELI KATAVDQATI RGIVERLKAR ELVQLSPDPG DRRKVIVELT ESGAALLDAM
IPCARQISEL SMGSLNAGER VAILYLLRKM IDSDENAG