Gene PP_3943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3943 
Symbol 
ID1046622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4445612 
End bp4446418 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content65% 
IMG OID637147353 
Productalpha/beta fold family hydrolase 
Protein accessionNP_746073 
Protein GI26990648 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0615663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.246043 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCT TCGTCGCTGG TGGTAACGTC AGCGCCAATG GCATCCGCCA GCATTACCTG 
CGCTATGGCG GCAAGGGCCA TGCGCTGATC CTGGTGCCGG GCATCACCAG CCCAGCGATC
ACCTGGGGCT TTGTCGCCGA GCGCCTTGGG CATTATTTCG ACACCTATGT GCTGGATGTG
CGCGGGCGTG GCTTGTCTTC AAGCGGCCCC GACCTGGACT ACGGCACCGA CGCTTGTGCT
GCGGATATTC CCGCCTTTGC CGCCGCGCTG GGCCTGGATA GCTACCATCT GCTCGGTCAC
TCGATGGGGG CGCGTTTTGC CATCCGCGCA GCCGCCCAAG GGGCACCGGG ACTGCAGCGG
CTGGTGCTGG TCGACCCACC GGTGTCCGGG CCGGGCCGCC GCGCCTACCC GAGCAAGTTG
CCGTGGTACG TCGATTCGAT CCGCCAAGCC ACGGTTGGCA TGAGCGGCGA TGACATGCGC
GCCTTCTGTG CCACCTGGAG CGACGAGCAG CTGGCCCTGC GTGCCGAGTG GCTGCACACC
TGCTACGAGC CGGCGATCGT GCGGGCCTTC GATGATTTCC ACGAGGTCGA TATCCACCAG
TACCTGCCTG CGGTGCGCCA GCCGGCATTG CTGATGGTGG CCGGGCGGGG TGGAGTGATC
GAGCCCCGTG ACATTGCTGA AATGCGCGAG CTCAAGCCGG ATATCCAGGT CGCGTACGTG
GACAACGCCG GCCACATGAT CCCCTGGGAT GACCTGGACG GTTTCTTCGC CGCCTTTGGC
GACTTCCTCG ACCACCCCCT CGTCTGA
 
Protein sequence
MSTFVAGGNV SANGIRQHYL RYGGKGHALI LVPGITSPAI TWGFVAERLG HYFDTYVLDV 
RGRGLSSSGP DLDYGTDACA ADIPAFAAAL GLDSYHLLGH SMGARFAIRA AAQGAPGLQR
LVLVDPPVSG PGRRAYPSKL PWYVDSIRQA TVGMSGDDMR AFCATWSDEQ LALRAEWLHT
CYEPAIVRAF DDFHEVDIHQ YLPAVRQPAL LMVAGRGGVI EPRDIAEMRE LKPDIQVAYV
DNAGHMIPWD DLDGFFAAFG DFLDHPLV