| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3912 |
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| Symbol | |
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| ID | 1046653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 4420249 |
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| End bp | 4421910 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637147321 |
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| Product | DNA-cytosine methyltransferase |
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| Protein accession | NP_746042 |
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| Protein GI | 26990617 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0270] Site-specific DNA methylase |
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| TIGRFAM ID | [TIGR00675] DNA-methyltransferase (dcm) |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.286893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00120484 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCATCA CCTACGGAAG CGTCTGCAGC GGCATTGAAG CTGCGACCGT GGCCTGGCAC
CCGCTGGGCT GGCGTGCCGA GTGGTATGCC GAGATCGAGC CATTCCCCTG CGCTGTTCTG
GCTCACCACT ACCCCGCTAC GCCGAACCAC GGCGACATGA CCCGCCTGGC AGCCATGGTG
CTGTCCGGCA AGATTCCAGC GCCCGAGGTG CTGGTCGGCG GCACGCCCTG CCAGGCCTTC
AGCGTGGCCG GCATGCGAGA AGGCCTGGCC GATCCCCGCG GCGCCCTCAC CATCAAATAC
GTGGAGCTGC TCGATGCAAT TGACCATGTT CGAACAAGGC GTGGCCAGCC CGAGGCCGCC
TGCCTCTGGG AAAACGTCCC CGGCGTCCTC TCCGACAAAG GCAACGCGTT TGGCTGCTTC
CTCGGCGCCC TGGTGGGCGA ATCCGAAGAA CTCCAGCCGC CAGGGGGCAA ATGGAAGGAC
GCTGGTTGTG TGTATGGACC CACGAGAACA GTCGCATGGC GGGTTCTGGA TGCCCAATAT
TTCGGCCTGG CCCAACGACG CCGCCGTGTG TTCGTTGTCG CAAGTGCTCG AGCAGGGTTC
GATCCCCTCG AAGTACTTTT TGAGCGCGAA GGCGTGCGCC GGGATACTCC GCCGCGCCGA
GGCGAGGGGC AAGACCTTGC CGGACGAGCT CCATTCGGCC CTGCGCTCCA GTGCGGATGC
GGATGGATCT TTGGTCTAGA CCTTGGTCAA TATGGCTGCC CGAACTGCGA GGGCGACGAA
GGTCCAGCGG TTGAGGTGCT GGCTGGCGTG CCGGCATATG GCGGCCACAG CCTTCAGGGC
GATGTCAGCC AGGCCGCCAC ACTGACCGCC AAGGACACGC GCCTGGACAT GGAAAGCGAG
ACTTTCTGCA TCGCGCCGAC CATCACTGGA GGAGCCAGGA AGTCGGGCGG CTACAGCCCT
GACGATATCC CAATGGTCGC TGGCACATTG CAGGCAAACG GCAAGGCCGC CGGCAGTGCC
ACCCAGCAGG ACGCCGAGAA CGGCATGCTG GTGGTGCACG GCACCCAAGA CCCTGACGTG
CTGCATAACC TGGTGCACCC GCTGGGCCGG AACAGTGGGC AAGAAAACGC CCTACTTGCC
TTCAGCTGCA AGGATCACGG CGCCGATGCA GGCGACCTGG CGCCAACCCT ACGGGCCATG
AACCACAGCG CCAGCCATCC CAACGCCGGC GGCCAGGTCG CCGTGTGCAT CACAGGCGAG
ATCACGCACA CGCTGAAGGC CGAGGGCTTT GATGCCAGCG AAGACGGCAC GGGCCGTGGG
CAGCCAATCG TTGCTCACGC CATCCAGGCC GGCGCTCTGC GCGAAAACCC AGCGAGCGGT
CCAGATGGCG TTGGTGTGCA GGCCGATCAC GCATACACAT TGGAAGCACG GGCAGAAGTC
CAAGCCATTC AGACCAATGC GCAGGTGCGC CGCCTCACTC CACGGGAGTG CGAATGGCTC
CAGGGCTTTC CCGGCGACCA CACCCGCATC CCCTATCGCG GCAAGCCTGC AGACGAATGC
CCTGACGGGC CGCGCTACAA GGCGATCGGC AACAGCAAGG CCGTGTTCGT CGTCCGCTGG
ATCGGCCGGC GCATCCAACA ACAACTTGAA CGTCTTGCTT GA
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| Protein sequence | MPITYGSVCS GIEAATVAWH PLGWRAEWYA EIEPFPCAVL AHHYPATPNH GDMTRLAAMV
LSGKIPAPEV LVGGTPCQAF SVAGMREGLA DPRGALTIKY VELLDAIDHV RTRRGQPEAA
CLWENVPGVL SDKGNAFGCF LGALVGESEE LQPPGGKWKD AGCVYGPTRT VAWRVLDAQY
FGLAQRRRRV FVVASARAGF DPLEVLFERE GVRRDTPPRR GEGQDLAGRA PFGPALQCGC
GWIFGLDLGQ YGCPNCEGDE GPAVEVLAGV PAYGGHSLQG DVSQAATLTA KDTRLDMESE
TFCIAPTITG GARKSGGYSP DDIPMVAGTL QANGKAAGSA TQQDAENGML VVHGTQDPDV
LHNLVHPLGR NSGQENALLA FSCKDHGADA GDLAPTLRAM NHSASHPNAG GQVAVCITGE
ITHTLKAEGF DASEDGTGRG QPIVAHAIQA GALRENPASG PDGVGVQADH AYTLEARAEV
QAIQTNAQVR RLTPRECEWL QGFPGDHTRI PYRGKPADEC PDGPRYKAIG NSKAVFVVRW
IGRRIQQQLE RLA
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