Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3894 |
Symbol | |
ID | 1046671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 4410308 |
End bp | 4411138 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637147303 |
Product | phage replication protein O, putative |
Protein accession | NP_746024 |
Protein GI | 26990599 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01610] phage replication protein O, N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00393455 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAGCAATG TCACCCCCAT TCAAACGAAA AGCGGATTCA CTCGTATGAA CAACGACCTG TATGAGGCTC TGATCGGGGC TGAATTGTCA GGCCGCGAGC TTCGTGTCGC CCTGGCCATT CACCGGCTGA CCGCTGGCTA CAATCAGGAT TCCGTCAAGG TTGCCGCCCT GTACGTTGCC AAGATGATGT ATCCGGATGA AGCGAAGGCC GCTGCCGAGC GCGCCAACGT GTCTCGGGCG ATCAATTCGT TGATCCGTCA GCGCGTGCTT TTCCGCGATG GCGGCAGTCG CGACCCAATC ACTTTCCTAC CGGTACCTGA GTGGAGAATC GACAGCAAGC CAACCGTGTT GAAATCTACA CACTGTGTAG AAAACACCCC TGCCACTGTG TTGAAAATTA CACACATAAA AGACAGAAAT ACAAATACCA ATGCTAACGC ATTGGTTGTC GACGCATCCG CATCGACCGG CGCCGAGGAA GGCGGTCACG GCAACGACAA GGCAACCCCT CCAGCTGGCC AGCCCATGGC CGCCAAAGTC GACAAGACCC CGTATGCCCG GATCGTCGAA ATCTACAACC AAACTTGCGG CCACGCGCTG CCCCAGTGCC TGAAGCTCAA TGACAAGCGC CGCACCAACA TCCGGAATTG CTGGAATCTG AAGATCAATG GCGTTCAGCC ATTCCGTTCA AGCGAATTCT GGGCGGCCTA CTTCCGCGAC TGCCTGACCA GCAAGCACTA CACCGGCAGC AATGACCGCG GCTGGACCGC CGACATCGAG TTCCTGACCC GCGAAACCAC CGTGCTCAAG GTGCTGGAGG CGCAGCAATG A
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Protein sequence | MSNVTPIQTK SGFTRMNNDL YEALIGAELS GRELRVALAI HRLTAGYNQD SVKVAALYVA KMMYPDEAKA AAERANVSRA INSLIRQRVL FRDGGSRDPI TFLPVPEWRI DSKPTVLKST HCVENTPATV LKITHIKDRN TNTNANALVV DASASTGAEE GGHGNDKATP PAGQPMAAKV DKTPYARIVE IYNQTCGHAL PQCLKLNDKR RTNIRNCWNL KINGVQPFRS SEFWAAYFRD CLTSKHYTGS NDRGWTADIE FLTRETTVLK VLEAQQ
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