| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3874 |
|---|
| Symbol | |
|---|
| ID | 1046691 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 4396309 |
|---|
| End bp | 4396683 |
|---|
| Gene Length | 375 bp |
|---|
| Protein Length | 124 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637147283 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_746004 |
|---|
| Protein GI | 26990579 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01563] phage head-tail adaptor, putative, SPP1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0495687 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAGCT CGATAGGTAC ACGCGAGCCG GAATCCGGCG AGCTGGACCG GCGCATTACT
ATTCGGCTGC GCGAAGATCT GCCTGTTGAT GATGCAGATC TGGATGCGGT ATTCACCCAG
CCTCGCCACC GATGGGCCAA GATCCGCGCC GTTGGCACAG CGGTCTACAC CGACAGTGTC
CAAACGGACG ACAAGATCAC ACATCGGATG TGGGTTCGAC TGCTGGGCGG CGTCACGACC
TCACATGAGG TGGTGGCGGG AGGCAAGATC TACCGCGTCA AGCGCTGCGC CCCCTGGGGG
GCAGGGAAGC GCTTCACCCT GATCGAAGTT GAAGAACTCG GCCAGCAGCA AGAGGAAGGG
GGGCTCTATG GCTAA
|
|---|
| Protein sequence | MASSIGTREP ESGELDRRIT IRLREDLPVD DADLDAVFTQ PRHRWAKIRA VGTAVYTDSV
QTDDKITHRM WVRLLGGVTT SHEVVAGGKI YRVKRCAPWG AGKRFTLIEV EELGQQQEEG
GLYG
|
|---|
| |