Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3865 |
Symbol | |
ID | 1046700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 4388783 |
End bp | 4390738 |
Gene Length | 1956 bp |
Protein Length | 651 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637147274 |
Product | phage tail protein, putative |
Protein accession | NP_745995 |
Protein GI | 26990570 |
COG category | [S] Function unknown |
COG ID | [COG5283] Phage-related tail protein |
TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGACA AGTTTCAGCT CAAGGCGCTG ATCACCGGCG TCGACAAGCT TTCGCCGACC TTGGCGGGCG TGCGCAAGAA CATCTCCACG TTCCGCAAGA ACCTGGAGAG CACCGGTCTC GGAAAGATCG GCTGGAGCGA CATCATCACC GGCGGGGCCA TGGCGGCCCC GTTCATAGCC GGCGCCCGTG CGGCCATCGA CTTCGAGTCG CAAATGGCCG ACGTGCGCAA GGTGGTGAAC TTTGATACGC CGGACCAGTT CAAGAAAATG GGTGATGACA TTGGCCGTAT GTCCGAGCGA CTGCCTATGG CGGCCACCGA CATTGCCAAG ATCGTTGCCG CGGGCGGCCA ATCCGGCATT GCCCGTGACG AGCTGCTGGG CTTTGCCGAA GCGGCGGTAA AGATGGGTAT CGCCTTTGAC CAGACCGCCG ACGAGTCCGG CGACATGATG ACCACGTGGC GCACCGCGTT TCGCATGAAT CAGGCCGAGG TGGTGAGCTT GGCCGACCGC ATTAACTACT TGGGCAACAC CGGCCCGGCC AACACCAAGA AGATTTCCGC CATCGTCACC GAGGTCGGCG CGCTGGGGGA GGTGGCCGGC ATGTCGTCGG CGCAGGTAGC GGCTATCGGC GCGACCATGG CCGGGGTGGG TGTCAAACAG GACGTGGCGG CCACCGGCAT CAAGAACTTC ATGTTGGCCA TGACCAAGGG CACGGCGGCC ACTAAGGCCC AGGCAGACGC TTACAAGGCG TTGCGCCTGG ATGCCAAGAC CGTGGCCGAG AATATGCAGA AGGATGCCCA GGGCACCACG CTGGACCTGC TCAAGCGTAT TTCTTTGATC GATGCGGCGA AACGCCCGGC GATTCTGTCC GAGTTGTTTG GTACCGAGTC GATTACTGCC ATTACGCCGC TGCTGACCAA TCTGGAGCTG TTGCGCAGCA ACTTGGACAA GGTCAATGAC GCGAAAAAGT TCGCCGGCTC AATGGAGCAG GAATATGCAT CACGCGCCGC GACCACGCGT AACAACATGA CATTGTTGCG TGGCAGCATC GATAGGGTAG CGGTTGCTAT CGGCAATGCT TTGCTGCCCG GCATCAATGC GGTGCTCGAG CAACTGCGGC CGTGGATCAG CCATATGGCG CAGATGATCA GCGACAACCC GCAGTTGGTG CGCGGCATCG TCATTGCCGG GGCGGCCTTC ACCGCGCTGC GTGCGGCGGT GTTCGCGGCC ACAGTGGCCA CGCGGGTGCT CGGTGTGGCC TTCGCGGCCA CGCCGATTGG CCTGATCGCC GCGGGGATCG CGGCGGCGGC CGGTCTGATC GTCGCCAACT GGGAGAAGGT CGGGCCGTTC TTCAGCGCCC TGTGGGAGCT GATCAAGGCC TACACCACGC CGTTCATGGA ATTCATTAAA AGCGTGTTTG GCTGGGCCCC GCTGGCATTG ATCATCAAGA ACTGGGAACC GATCGTGGGC TGGTTCAAGG GGCTGTGGGA TCGGGTCAGC CCGTACCTTG AACCACTGCT AAAGCTGTTT GGTGGCGGTG ACGGCGAGAG CCTGACGGTG CGGGTGCAGC GCCTGGCTGA CGAGCAGAAA GCCCGTAACT CAGTGGCCGG CGGCAGCGGC GCCCTGGTGC AGGCCAATGC CGTGCAGGTC GCGCAGGGCG TCCAGGCGGC GCGCGAGCAA GCCTTTGGGG TAAGCCCTGA GGCGCTGTTG CGTGCGGCGA CCCCGCTGCC CGCACCGGGC GGCCTGCTGC GGGCGTCCGG CCAACTGCCC GAGCCGGGGG CTTTACTGCG TCAATCGGCG CAGGTGGGTG GCAAGCAGCA GCTGGAAGGG GAGGTGCGGG TGGCCTTCGA TAACTCGCCG CCTGGCCTGC GTGTCGAGTC GGTGAAAACC AGTCAGCCCG GCGTGACCAT CACGCCGAAT GTCGGGCGGC GAACCATGGG AGGCACCTAT GAGTGA
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Protein sequence | MADKFQLKAL ITGVDKLSPT LAGVRKNIST FRKNLESTGL GKIGWSDIIT GGAMAAPFIA GARAAIDFES QMADVRKVVN FDTPDQFKKM GDDIGRMSER LPMAATDIAK IVAAGGQSGI ARDELLGFAE AAVKMGIAFD QTADESGDMM TTWRTAFRMN QAEVVSLADR INYLGNTGPA NTKKISAIVT EVGALGEVAG MSSAQVAAIG ATMAGVGVKQ DVAATGIKNF MLAMTKGTAA TKAQADAYKA LRLDAKTVAE NMQKDAQGTT LDLLKRISLI DAAKRPAILS ELFGTESITA ITPLLTNLEL LRSNLDKVND AKKFAGSMEQ EYASRAATTR NNMTLLRGSI DRVAVAIGNA LLPGINAVLE QLRPWISHMA QMISDNPQLV RGIVIAGAAF TALRAAVFAA TVATRVLGVA FAATPIGLIA AGIAAAAGLI VANWEKVGPF FSALWELIKA YTTPFMEFIK SVFGWAPLAL IIKNWEPIVG WFKGLWDRVS PYLEPLLKLF GGGDGESLTV RVQRLADEQK ARNSVAGGSG ALVQANAVQV AQGVQAAREQ AFGVSPEALL RAATPLPAPG GLLRASGQLP EPGALLRQSA QVGGKQQLEG EVRVAFDNSP PGLRVESVKT SQPGVTITPN VGRRTMGGTY E
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