Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3807 |
Symbol | |
ID | 1046758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 4334829 |
End bp | 4335548 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637147215 |
Product | thioesterase |
Protein accession | NP_745937 |
Protein GI | 26990512 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3208] Predicted thioesterase involved in non-ribosomal peptide biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.39937 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGTGC TGAACCTGCT GTGCCTGCCG TACTCCGGGG CCAGCGCCAT GGTCTACAGC CGCTGGCGGC GCAAGCTGCC GGCATGGTTG CAGGTACGCC CGGTAGAGTT GCCTGGGCGG GGGGCGCGCA TGGCTGAGTC GCTGCACACC GACATGCAAG TGCTGGCTCG GCAACTGGCC AGCGAGCAGC GACTGGCGGC AAGCGCTCCT TATGCGCTGC TCGGCCACAG CCTGGGTGCA CTGCTGGCCT TCGAGCTGGC CCATGAGCTG CAGGCATTGG GCTGCCCGGC GCCGCTGGCC TTGTTCGCCT GCGGCACCGC GGCACCTACC CGGCGTGAGG ACTACGACGG CAACAACTGG CGCGAGCCCA AGAGCGACGC CGAGCTGATC AGCGAGTTGC GCGCGCTGCA GGGCACGCCT GAGGAAGTGC TGGCCAACGC TGAGCTGATG AGCCTGACCT TGCCGACCTT GCGCGCCGAT TTTCTGTTGT GCGGCACTTA CACCTACCGG CAGCGACCGG CGTTGCAGTG CCCACTGCAT GTGCTGGGTG GAGTGGAAGA CCGGGCCAGC GATGAGCAAC TGCGGGCATG GCGCAGTGAA ACCCAAGGCG CGTTCTCGCT GCAGATGTTC CCAGGTGGCC ATTTCTTCAT CCATGAGCAG GAAGACCGTG TGCTCGCTGC GCTGACCGCG TCGCTGCAAC CGCTTCGGCT GTCCGCCTGA
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Protein sequence | MTVLNLLCLP YSGASAMVYS RWRRKLPAWL QVRPVELPGR GARMAESLHT DMQVLARQLA SEQRLAASAP YALLGHSLGA LLAFELAHEL QALGCPAPLA LFACGTAAPT RREDYDGNNW REPKSDAELI SELRALQGTP EEVLANAELM SLTLPTLRAD FLLCGTYTYR QRPALQCPLH VLGGVEDRAS DEQLRAWRSE TQGAFSLQMF PGGHFFIHEQ EDRVLAALTA SLQPLRLSA
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