Gene PP_3806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3806 
Symbol 
ID1046759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4334221 
End bp4334772 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content64% 
IMG OID637147214 
Productisochorismatase superfamily hydrolase 
Protein accessionNP_745936 
Protein GI26990511 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.392907 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCG ATCCACTCAA GGCCACGCTA CTGGTCGTCG ACATCCAGGA AAAGCTGATC 
GGTGCCATGA GCGACCCCGA AGGCACTCGG GCACGGGCCC GTTGGTTGCT GGCGGCGACT
GCCGAGCTGG CGCTGCCGAC GGTGATTTCC GAGCAGTACC CCAAAGGCCT GGGTCATACC
CTGGCCGAAC TGCTGGCCGT AGCGCCGGCA GCCGAAGTGG TGGAAAAAAG TCACTTTTCC
TGCGTGGCTG CCGAGTGCCT GCCAGCCAGT TTGATGGCGC GTGAGCAGGT GATCGTCTGC
GGCATGGAAA CCCATGTTTG CGTGCTGCAG ACCGTGCTCG GCCTGTTGGC GCTGGGCAAG
CAAGTGTTCG TGGTCGAGGA TGCCTGCGAC AGCCGCACCC CGGCCAGCAA GGCCGCAGGC
CTGGCGCGCA TGCGTGCCGC CGGCGCGCAG GTAGTGACCC GCGAGATGGT GTTGTTCGAA
TTGATGGGCA GTGCCGGGCA CCCGCAGTTC CGCCACATCA GCAAAACCTA CCTGATCGGT
GAACAGCCCT GA
 
Protein sequence
MLIDPLKATL LVVDIQEKLI GAMSDPEGTR ARARWLLAAT AELALPTVIS EQYPKGLGHT 
LAELLAVAPA AEVVEKSHFS CVAAECLPAS LMAREQVIVC GMETHVCVLQ TVLGLLALGK
QVFVVEDACD SRTPASKAAG LARMRAAGAQ VVTREMVLFE LMGSAGHPQF RHISKTYLIG
EQP